Gene : Bradi3g55680 B. distachyon v3.1
Defline:  (1 of 28) PF03195 - Protein of unknown function DUF260 (DUF260) Genomic Order:  6924
Name:  ? Bradi3g55680 Secondary Identifier:  ? PAC:32814771
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55680 0.5kb upstream 0.5kb upstream 2411 true Bd3: 55608522-55610932 Brachypodium distachyon
Bradi3g55680 0.5kb upstream 0.5kb upstream 500 false Bd3: 55610433-55610932 Brachypodium distachyon
Bradi3g55680 0.5kb downstream 0.5kb downstream 2411 true Bd3: 55608022-55610432 Brachypodium distachyon
Bradi3g55680 0.5kb downstream 0.5kb downstream 500 false Bd3: 55608022-55608521 Brachypodium distachyon
Bradi3g55680 1.0kb upstream 1.0kb upstream 2911 true Bd3: 55608522-55611432 Brachypodium distachyon
Bradi3g55680 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55610433-55611432 Brachypodium distachyon
Bradi3g55680 1.0kb downstream 1.0kb downstream 2911 true Bd3: 55607522-55610432 Brachypodium distachyon
Bradi3g55680 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55607522-55608521 Brachypodium distachyon
Bradi3g55680 2.0kb upstream 2.0kb upstream 3911 true Bd3: 55608522-55612432 Brachypodium distachyon
Bradi3g55680 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55610433-55612432 Brachypodium distachyon
Bradi3g55680 2.0kb downstream 2.0kb downstream 3911 true Bd3: 55606522-55610432 Brachypodium distachyon
Bradi3g55680 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55606522-55608521 Brachypodium distachyon
Bradi3g55680 5.0kb upstream 5.0kb upstream 6911 true Bd3: 55608522-55615432 Brachypodium distachyon
Bradi3g55680 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55610433-55615432 Brachypodium distachyon
Bradi3g55680 5.0kb downstream 5.0kb downstream 6911 true Bd3: 55603522-55610432 Brachypodium distachyon
Bradi3g55680 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55603522-55608521 Brachypodium distachyon
Bradi3g55680 10.0kb upstream 10.0kb upstream 11911 true Bd3: 55608522-55620432 Brachypodium distachyon
Bradi3g55680 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55610433-55620432 Brachypodium distachyon
Bradi3g55680 10.0kb downstream 10.0kb downstream 11911 true Bd3: 55598522-55610432 Brachypodium distachyon
Bradi3g55680 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55598522-55608521 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027059 5273 Angiosperm View MSA
124582582 5269 Grass View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.101        
cufflinks 0.049     Low  
cufflinks 0.096        
cufflinks 0.116        
cufflinks 0.319       High
cufflinks 0.067     Low  
cufflinks 0.061     Low  
cufflinks 0.123        
cufflinks 0.053     Low  
cufflinks 0.074     Low  
cufflinks 0.532       High
cufflinks 0.054     Low  
cufflinks 0.131        
cufflinks 0.283        
cufflinks 0.144        
cufflinks 0.035     Low  
cufflinks 0.022     Low Low
cufflinks 0.773       High
cufflinks 0.105     Low  
cufflinks 0.288        
cufflinks 0.042     Low  
cufflinks 0.095     Low  
cufflinks 0.046     Low  
cufflinks 0.083     Low  
cufflinks 0.047     Low  
cufflinks 0.061     Low  
cufflinks 0.013     Low Low
cufflinks 0.063     Low  
cufflinks 0.191        
cufflinks 0.014     Low Low

0 Strain