Gene : Bradi3g55700 B. distachyon v3.1
Defline:  (1 of 1) 1.14.99.29 - Deoxyhypusine monooxygenase / DOHH Genomic Order:  6926
Name:  ? Bradi3g55700 Secondary Identifier:  ? PAC:32813288
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5905 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55700 0.5kb upstream 0.5kb upstream 4113 true Bd3: 55614477-55618589 Brachypodium distachyon
Bradi3g55700 0.5kb upstream 0.5kb upstream 500 false Bd3: 55618090-55618589 Brachypodium distachyon
Bradi3g55700 0.5kb downstream 0.5kb downstream 4113 true Bd3: 55613977-55618089 Brachypodium distachyon
Bradi3g55700 0.5kb downstream 0.5kb downstream 500 false Bd3: 55613977-55614476 Brachypodium distachyon
Bradi3g55700 1.0kb upstream 1.0kb upstream 4613 true Bd3: 55614477-55619089 Brachypodium distachyon
Bradi3g55700 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55618090-55619089 Brachypodium distachyon
Bradi3g55700 1.0kb downstream 1.0kb downstream 4613 true Bd3: 55613477-55618089 Brachypodium distachyon
Bradi3g55700 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55613477-55614476 Brachypodium distachyon
Bradi3g55700 2.0kb upstream 2.0kb upstream 5613 true Bd3: 55614477-55620089 Brachypodium distachyon
Bradi3g55700 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55618090-55620089 Brachypodium distachyon
Bradi3g55700 2.0kb downstream 2.0kb downstream 5613 true Bd3: 55612477-55618089 Brachypodium distachyon
Bradi3g55700 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55612477-55614476 Brachypodium distachyon
Bradi3g55700 5.0kb upstream 5.0kb upstream 8613 true Bd3: 55614477-55623089 Brachypodium distachyon
Bradi3g55700 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55618090-55623089 Brachypodium distachyon
Bradi3g55700 5.0kb downstream 5.0kb downstream 8613 true Bd3: 55609477-55618089 Brachypodium distachyon
Bradi3g55700 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55609477-55614476 Brachypodium distachyon
Bradi3g55700 10.0kb upstream 10.0kb upstream 13613 true Bd3: 55614477-55628089 Brachypodium distachyon
Bradi3g55700 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55618090-55628089 Brachypodium distachyon
Bradi3g55700 10.0kb downstream 10.0kb downstream 13613 true Bd3: 55604477-55618089 Brachypodium distachyon
Bradi3g55700 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55604477-55614476 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573360 5269 Grass View MSA
122045074 5273 Angiosperm View MSA
121346914 5274 Embryophyte View MSA
123424713 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.1        
cufflinks 5.265        
cufflinks 6.083        
cufflinks 5.01        
cufflinks 3.616       Low
cufflinks 4.706        
cufflinks 5.228        
cufflinks 5.359        
cufflinks 5.358        
cufflinks 5.345        
cufflinks 4.911        
cufflinks 4.75        
cufflinks 3.424       Low
cufflinks 4.072        
cufflinks 3.391       Low
cufflinks 4.948        
cufflinks 4.096        
cufflinks 10.71       High
cufflinks 8.15       High
cufflinks 5.513        
cufflinks 6.266        
cufflinks 5.815        
cufflinks 4.921        
cufflinks 4.356        
cufflinks 4.899        
cufflinks 5.805        
cufflinks 4.015        
cufflinks 6.006        
cufflinks 6.191        
cufflinks 5.613        

0 Strain