Gene : Bradi3g55840 B. distachyon v3.1
Defline:  (1 of 1) PTHR10283//PTHR10283:SF94 - SOLUTE CARRIER FAMILY 13 MEMBER // SUBFAMILY NOT NAMED Genomic Order:  6942
Name:  ? Bradi3g55840 Secondary Identifier:  ? PAC:32814411
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g55840 0.5kb upstream 0.5kb upstream 5092 true Bd3: 55687104-55692195 Brachypodium distachyon
Bradi3g55840 0.5kb upstream 0.5kb upstream 500 false Bd3: 55687104-55687603 Brachypodium distachyon
Bradi3g55840 0.5kb downstream 0.5kb downstream 5092 true Bd3: 55687604-55692695 Brachypodium distachyon
Bradi3g55840 0.5kb downstream 0.5kb downstream 500 false Bd3: 55692196-55692695 Brachypodium distachyon
Bradi3g55840 1.0kb upstream 1.0kb upstream 5592 true Bd3: 55686604-55692195 Brachypodium distachyon
Bradi3g55840 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55686604-55687603 Brachypodium distachyon
Bradi3g55840 1.0kb downstream 1.0kb downstream 5592 true Bd3: 55687604-55693195 Brachypodium distachyon
Bradi3g55840 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55692196-55693195 Brachypodium distachyon
Bradi3g55840 2.0kb upstream 2.0kb upstream 6592 true Bd3: 55685604-55692195 Brachypodium distachyon
Bradi3g55840 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55685604-55687603 Brachypodium distachyon
Bradi3g55840 2.0kb downstream 2.0kb downstream 6592 true Bd3: 55687604-55694195 Brachypodium distachyon
Bradi3g55840 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55692196-55694195 Brachypodium distachyon
Bradi3g55840 5.0kb upstream 5.0kb upstream 9592 true Bd3: 55682604-55692195 Brachypodium distachyon
Bradi3g55840 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55682604-55687603 Brachypodium distachyon
Bradi3g55840 5.0kb downstream 5.0kb downstream 9592 true Bd3: 55687604-55697195 Brachypodium distachyon
Bradi3g55840 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55692196-55697195 Brachypodium distachyon
Bradi3g55840 10.0kb upstream 10.0kb upstream 14592 true Bd3: 55677604-55692195 Brachypodium distachyon
Bradi3g55840 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55677604-55687603 Brachypodium distachyon
Bradi3g55840 10.0kb downstream 10.0kb downstream 14592 true Bd3: 55687604-55702195 Brachypodium distachyon
Bradi3g55840 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55692196-55702195 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577148 5269 Grass View MSA
122043683 5273 Angiosperm View MSA
121350311 5274 Embryophyte View MSA
123381672 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 55.841     High High
cufflinks 31.186     High  
cufflinks 13.699     High  
cufflinks 18.867     High  
cufflinks 13.486     High  
cufflinks 56.567     High High
cufflinks 50.936     High High
cufflinks 20.358     High  
cufflinks 47.189     High High
cufflinks 8.715       Low
cufflinks 33.818     High  
cufflinks 36.064     High  
cufflinks 60.535     High High
cufflinks 43.401     High  
cufflinks 26.758     High  
cufflinks 44.275     High  
cufflinks 24.497     High  
cufflinks 13.298     High  
cufflinks 23.444     High  
cufflinks 7.138       Low
cufflinks 33.483     High  
cufflinks 10.261     High Low
cufflinks 22.15     High  
cufflinks 46.015     High High
cufflinks 48.66     High High
cufflinks 12.619     High  
cufflinks 65.55     High High
cufflinks 12.629     High  
cufflinks 10.952     High Low
cufflinks 37.235     High  

0 Strain