Gene : Bradi3g56070 B. distachyon v3.1
Defline:  (1 of 1) PTHR23086:SF42 - PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 9 Genomic Order:  6969
Name:  ? Bradi3g56070 Secondary Identifier:  ? PAC:32815315
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6351 Brachypodium distachyon pathologic  
Bdistachyon PWY-6352 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g56070 0.5kb upstream 0.5kb upstream 6550 true Bd3: 55840556-55847105 Brachypodium distachyon
Bradi3g56070 0.5kb upstream 0.5kb upstream 500 false Bd3: 55840556-55841055 Brachypodium distachyon
Bradi3g56070 0.5kb downstream 0.5kb downstream 6550 true Bd3: 55841056-55847605 Brachypodium distachyon
Bradi3g56070 0.5kb downstream 0.5kb downstream 500 false Bd3: 55847106-55847605 Brachypodium distachyon
Bradi3g56070 1.0kb upstream 1.0kb upstream 7050 true Bd3: 55840056-55847105 Brachypodium distachyon
Bradi3g56070 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55840056-55841055 Brachypodium distachyon
Bradi3g56070 1.0kb downstream 1.0kb downstream 7050 true Bd3: 55841056-55848105 Brachypodium distachyon
Bradi3g56070 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55847106-55848105 Brachypodium distachyon
Bradi3g56070 2.0kb upstream 2.0kb upstream 8050 true Bd3: 55839056-55847105 Brachypodium distachyon
Bradi3g56070 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55839056-55841055 Brachypodium distachyon
Bradi3g56070 2.0kb downstream 2.0kb downstream 8050 true Bd3: 55841056-55849105 Brachypodium distachyon
Bradi3g56070 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55847106-55849105 Brachypodium distachyon
Bradi3g56070 5.0kb upstream 5.0kb upstream 11050 true Bd3: 55836056-55847105 Brachypodium distachyon
Bradi3g56070 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55836056-55841055 Brachypodium distachyon
Bradi3g56070 5.0kb downstream 5.0kb downstream 11050 true Bd3: 55841056-55852105 Brachypodium distachyon
Bradi3g56070 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55847106-55852105 Brachypodium distachyon
Bradi3g56070 10.0kb upstream 10.0kb upstream 16050 true Bd3: 55831056-55847105 Brachypodium distachyon
Bradi3g56070 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55831056-55841055 Brachypodium distachyon
Bradi3g56070 10.0kb downstream 10.0kb downstream 16050 true Bd3: 55841056-55857105 Brachypodium distachyon
Bradi3g56070 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55847106-55857105 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026416 5273 Angiosperm View MSA
124568328 5269 Grass View MSA
121350823 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.349     High  
cufflinks 12.668     High  
cufflinks 14.142     High  
cufflinks 8.482        
cufflinks 8.073        
cufflinks 13.21     High  
cufflinks 12.495     High  
cufflinks 9.423     High  
cufflinks 12.435     High  
cufflinks 10.168        
cufflinks 21.462     High High
cufflinks 14.845     High  
cufflinks 19.184     High High
cufflinks 16.319     High  
cufflinks 9.201     High  
cufflinks 13.565     High  
cufflinks 7.152        
cufflinks 28.922     High High
cufflinks 11.238        
cufflinks 4.703       Low
cufflinks 8.795        
cufflinks 17.061     High  
cufflinks 9.359     High  
cufflinks 11.187     High  
cufflinks 10.853     High  
cufflinks 12.695     High  
cufflinks 26.078     High High
cufflinks 14.289     High  
cufflinks 13.592     High  
cufflinks 11.082        

0 Strain