Gene : Bradi3g56310 B. distachyon v3.1
Defline:  (1 of 1) PTHR13282:SF6 - PROTEIN FAM32A Genomic Order:  7002
Name:  ? Bradi3g56310 Secondary Identifier:  ? PAC:32820275
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g56310 0.5kb upstream 0.5kb upstream 2403 true Bd3: 56002080-56004482 Brachypodium distachyon
Bradi3g56310 0.5kb upstream 0.5kb upstream 500 false Bd3: 56002080-56002579 Brachypodium distachyon
Bradi3g56310 0.5kb downstream 0.5kb downstream 2403 true Bd3: 56002580-56004982 Brachypodium distachyon
Bradi3g56310 0.5kb downstream 0.5kb downstream 500 false Bd3: 56004483-56004982 Brachypodium distachyon
Bradi3g56310 1.0kb upstream 1.0kb upstream 2903 true Bd3: 56001580-56004482 Brachypodium distachyon
Bradi3g56310 1.0kb upstream 1.0kb upstream 1000 false Bd3: 56001580-56002579 Brachypodium distachyon
Bradi3g56310 1.0kb downstream 1.0kb downstream 2903 true Bd3: 56002580-56005482 Brachypodium distachyon
Bradi3g56310 1.0kb downstream 1.0kb downstream 1000 false Bd3: 56004483-56005482 Brachypodium distachyon
Bradi3g56310 2.0kb upstream 2.0kb upstream 3903 true Bd3: 56000580-56004482 Brachypodium distachyon
Bradi3g56310 2.0kb upstream 2.0kb upstream 2000 false Bd3: 56000580-56002579 Brachypodium distachyon
Bradi3g56310 2.0kb downstream 2.0kb downstream 3903 true Bd3: 56002580-56006482 Brachypodium distachyon
Bradi3g56310 2.0kb downstream 2.0kb downstream 2000 false Bd3: 56004483-56006482 Brachypodium distachyon
Bradi3g56310 5.0kb upstream 5.0kb upstream 6903 true Bd3: 55997580-56004482 Brachypodium distachyon
Bradi3g56310 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55997580-56002579 Brachypodium distachyon
Bradi3g56310 5.0kb downstream 5.0kb downstream 6903 true Bd3: 56002580-56009482 Brachypodium distachyon
Bradi3g56310 5.0kb downstream 5.0kb downstream 5000 false Bd3: 56004483-56009482 Brachypodium distachyon
Bradi3g56310 10.0kb upstream 10.0kb upstream 11903 true Bd3: 55992580-56004482 Brachypodium distachyon
Bradi3g56310 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55992580-56002579 Brachypodium distachyon
Bradi3g56310 10.0kb downstream 10.0kb downstream 11903 true Bd3: 56002580-56014482 Brachypodium distachyon
Bradi3g56310 10.0kb downstream 10.0kb downstream 10000 false Bd3: 56004483-56014482 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573208 5269 Grass View MSA
122045426 5273 Angiosperm View MSA
121347666 5274 Embryophyte View MSA
123426193 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.922     High  
cufflinks 25.528     High  
cufflinks 29.207     High  
cufflinks 35.182     High  
cufflinks 42.707     High  
cufflinks 23.862     High  
cufflinks 25.421     High  
cufflinks 21.759     High Low
cufflinks 22.809     High Low
cufflinks 58.575     High High
cufflinks 27.542     High  
cufflinks 20.817     High Low
cufflinks 19.89     High Low
cufflinks 25.041     High  
cufflinks 26.827     High  
cufflinks 20.873     High Low
cufflinks 39.457     High  
cufflinks 27.024     High  
cufflinks 40.996     High  
cufflinks 92.53     High High
cufflinks 56.519     High High
cufflinks 27.96     High  
cufflinks 23.017     High  
cufflinks 22.273     High Low
cufflinks 30.972     High  
cufflinks 46.399     High  
cufflinks 23.659     High  
cufflinks 41.723     High  
cufflinks 37.985     High  
cufflinks 36.652     High  

0 Strain