Gene : Bradi4g27620 B. distachyon v3.1
Defline:  (1 of 19) PF00249//PF14379 - Myb-like DNA-binding domain (Myb_DNA-binding) // MYB-CC type transfactor, LHEQLE motif (Myb_CC_LHEQLE) Genomic Order:  3516
Name:  ? Bradi4g27620 Secondary Identifier:  ? PAC:32787400
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27620 0.5kb upstream 0.5kb upstream 4827 true Bd4: 32687690-32692516 Brachypodium distachyon
Bradi4g27620 0.5kb upstream 0.5kb upstream 500 false Bd4: 32687690-32688189 Brachypodium distachyon
Bradi4g27620 0.5kb downstream 0.5kb downstream 4827 true Bd4: 32688190-32693016 Brachypodium distachyon
Bradi4g27620 0.5kb downstream 0.5kb downstream 500 false Bd4: 32692517-32693016 Brachypodium distachyon
Bradi4g27620 1.0kb upstream 1.0kb upstream 5327 true Bd4: 32687190-32692516 Brachypodium distachyon
Bradi4g27620 1.0kb upstream 1.0kb upstream 1000 false Bd4: 32687190-32688189 Brachypodium distachyon
Bradi4g27620 1.0kb downstream 1.0kb downstream 5327 true Bd4: 32688190-32693516 Brachypodium distachyon
Bradi4g27620 1.0kb downstream 1.0kb downstream 1000 false Bd4: 32692517-32693516 Brachypodium distachyon
Bradi4g27620 2.0kb upstream 2.0kb upstream 6327 true Bd4: 32686190-32692516 Brachypodium distachyon
Bradi4g27620 2.0kb upstream 2.0kb upstream 2000 false Bd4: 32686190-32688189 Brachypodium distachyon
Bradi4g27620 2.0kb downstream 2.0kb downstream 6327 true Bd4: 32688190-32694516 Brachypodium distachyon
Bradi4g27620 2.0kb downstream 2.0kb downstream 2000 false Bd4: 32692517-32694516 Brachypodium distachyon
Bradi4g27620 5.0kb upstream 5.0kb upstream 9327 true Bd4: 32683190-32692516 Brachypodium distachyon
Bradi4g27620 5.0kb upstream 5.0kb upstream 5000 false Bd4: 32683190-32688189 Brachypodium distachyon
Bradi4g27620 5.0kb downstream 5.0kb downstream 9327 true Bd4: 32688190-32697516 Brachypodium distachyon
Bradi4g27620 5.0kb downstream 5.0kb downstream 5000 false Bd4: 32692517-32697516 Brachypodium distachyon
Bradi4g27620 10.0kb upstream 10.0kb upstream 14327 true Bd4: 32678190-32692516 Brachypodium distachyon
Bradi4g27620 10.0kb upstream 10.0kb upstream 10000 false Bd4: 32678190-32688189 Brachypodium distachyon
Bradi4g27620 10.0kb downstream 10.0kb downstream 14327 true Bd4: 32688190-32702516 Brachypodium distachyon
Bradi4g27620 10.0kb downstream 10.0kb downstream 10000 false Bd4: 32692517-32702516 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572276 5269 Grass View MSA
122045611 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.47        
cufflinks 4.27        
cufflinks 4.453        
cufflinks 3.97        
cufflinks 4.513        
cufflinks 3.704        
cufflinks 3.863        
cufflinks 4.498        
cufflinks 3.882        
cufflinks 4.312        
cufflinks 4.934        
cufflinks 3.956        
cufflinks 4.024        
cufflinks 3.646        
cufflinks 4.78        
cufflinks 4.324        
cufflinks 4.458        
cufflinks 6.171       High
cufflinks 7.392       High
cufflinks 6.127       High
cufflinks 5.551        
cufflinks 4.836        
cufflinks 4.425        
cufflinks 3.958        
cufflinks 3.686        
cufflinks 4.207        
cufflinks 4.487        
cufflinks 4.443        
cufflinks 4.419        
cufflinks 5.192        

0 Strain