Gene : Bradi3g56240 B. distachyon v3.1
Defline:  (1 of 1) K11129 - H/ACA ribonucleoprotein complex subunit 2 (NHP2, NOLA2) Genomic Order:  6995
Name:  ? Bradi3g56240 Secondary Identifier:  ? PAC:32813810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g56240 0.5kb upstream 0.5kb upstream 2880 true Bd3: 55964565-55967444 Brachypodium distachyon
Bradi3g56240 0.5kb upstream 0.5kb upstream 500 false Bd3: 55964565-55965064 Brachypodium distachyon
Bradi3g56240 0.5kb downstream 0.5kb downstream 2880 true Bd3: 55965065-55967944 Brachypodium distachyon
Bradi3g56240 0.5kb downstream 0.5kb downstream 500 false Bd3: 55967445-55967944 Brachypodium distachyon
Bradi3g56240 1.0kb upstream 1.0kb upstream 3380 true Bd3: 55964065-55967444 Brachypodium distachyon
Bradi3g56240 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55964065-55965064 Brachypodium distachyon
Bradi3g56240 1.0kb downstream 1.0kb downstream 3380 true Bd3: 55965065-55968444 Brachypodium distachyon
Bradi3g56240 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55967445-55968444 Brachypodium distachyon
Bradi3g56240 2.0kb upstream 2.0kb upstream 4380 true Bd3: 55963065-55967444 Brachypodium distachyon
Bradi3g56240 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55963065-55965064 Brachypodium distachyon
Bradi3g56240 2.0kb downstream 2.0kb downstream 4380 true Bd3: 55965065-55969444 Brachypodium distachyon
Bradi3g56240 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55967445-55969444 Brachypodium distachyon
Bradi3g56240 5.0kb upstream 5.0kb upstream 7380 true Bd3: 55960065-55967444 Brachypodium distachyon
Bradi3g56240 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55960065-55965064 Brachypodium distachyon
Bradi3g56240 5.0kb downstream 5.0kb downstream 7380 true Bd3: 55965065-55972444 Brachypodium distachyon
Bradi3g56240 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55967445-55972444 Brachypodium distachyon
Bradi3g56240 10.0kb upstream 10.0kb upstream 12380 true Bd3: 55955065-55967444 Brachypodium distachyon
Bradi3g56240 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55955065-55965064 Brachypodium distachyon
Bradi3g56240 10.0kb downstream 10.0kb downstream 12380 true Bd3: 55965065-55977444 Brachypodium distachyon
Bradi3g56240 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55967445-55977444 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040888 5273 Angiosperm View MSA
124585008 5269 Grass View MSA
121345742 5274 Embryophyte View MSA
123425979 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.664     High  
cufflinks 14.827     High  
cufflinks 11.966     High  
cufflinks 19.057     High  
cufflinks 9.215     High  
cufflinks 12.262     High  
cufflinks 14.588     High  
cufflinks 10.351     High  
cufflinks 11.676     High  
cufflinks 12.288     High  
cufflinks 1.709       Low
cufflinks 9.213     High  
cufflinks 1.228       Low
cufflinks 1.425       Low
cufflinks 4.995        
cufflinks 11.779     High  
cufflinks 17.842     High  
cufflinks 25.764     High High
cufflinks 15.513     High  
cufflinks 3.182       Low
cufflinks 18.391     High  
cufflinks 8.797        
cufflinks 8.275        
cufflinks 8.516        
cufflinks 15.109     High  
cufflinks 12.465     High  
cufflinks 2.317       Low
cufflinks 11.277     High  
cufflinks 10.824     High  
cufflinks 17.094     High  

0 Strain