Gene : Bradi3g56190 B. distachyon v3.1
Defline:  (1 of 18) PF00581 - Rhodanese-like domain (Rhodanese) Genomic Order:  6989
Name:  ? Bradi3g56190 Secondary Identifier:  ? PAC:32819825
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g56190 0.5kb upstream 0.5kb upstream 2804 true Bd3: 55945107-55947910 Brachypodium distachyon
Bradi3g56190 0.5kb upstream 0.5kb upstream 500 false Bd3: 55945107-55945606 Brachypodium distachyon
Bradi3g56190 0.5kb downstream 0.5kb downstream 2804 true Bd3: 55945607-55948410 Brachypodium distachyon
Bradi3g56190 0.5kb downstream 0.5kb downstream 500 false Bd3: 55947911-55948410 Brachypodium distachyon
Bradi3g56190 1.0kb upstream 1.0kb upstream 3304 true Bd3: 55944607-55947910 Brachypodium distachyon
Bradi3g56190 1.0kb upstream 1.0kb upstream 1000 false Bd3: 55944607-55945606 Brachypodium distachyon
Bradi3g56190 1.0kb downstream 1.0kb downstream 3304 true Bd3: 55945607-55948910 Brachypodium distachyon
Bradi3g56190 1.0kb downstream 1.0kb downstream 1000 false Bd3: 55947911-55948910 Brachypodium distachyon
Bradi3g56190 2.0kb upstream 2.0kb upstream 4304 true Bd3: 55943607-55947910 Brachypodium distachyon
Bradi3g56190 2.0kb upstream 2.0kb upstream 2000 false Bd3: 55943607-55945606 Brachypodium distachyon
Bradi3g56190 2.0kb downstream 2.0kb downstream 4304 true Bd3: 55945607-55949910 Brachypodium distachyon
Bradi3g56190 2.0kb downstream 2.0kb downstream 2000 false Bd3: 55947911-55949910 Brachypodium distachyon
Bradi3g56190 5.0kb upstream 5.0kb upstream 7304 true Bd3: 55940607-55947910 Brachypodium distachyon
Bradi3g56190 5.0kb upstream 5.0kb upstream 5000 false Bd3: 55940607-55945606 Brachypodium distachyon
Bradi3g56190 5.0kb downstream 5.0kb downstream 7304 true Bd3: 55945607-55952910 Brachypodium distachyon
Bradi3g56190 5.0kb downstream 5.0kb downstream 5000 false Bd3: 55947911-55952910 Brachypodium distachyon
Bradi3g56190 10.0kb upstream 10.0kb upstream 12304 true Bd3: 55935607-55947910 Brachypodium distachyon
Bradi3g56190 10.0kb upstream 10.0kb upstream 10000 false Bd3: 55935607-55945606 Brachypodium distachyon
Bradi3g56190 10.0kb downstream 10.0kb downstream 12304 true Bd3: 55945607-55957910 Brachypodium distachyon
Bradi3g56190 10.0kb downstream 10.0kb downstream 10000 false Bd3: 55947911-55957910 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041508 5273 Angiosperm View MSA
124568527 5269 Grass View MSA
121347966 5274 Embryophyte View MSA
123427649 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.742     High  
cufflinks 79.501     High  
cufflinks 70.719     High  
cufflinks 85.847     High  
cufflinks 83.32     High  
cufflinks 97.643     High  
cufflinks 105.456     High  
cufflinks 88.079     High  
cufflinks 99.422     High  
cufflinks 98.676     High  
cufflinks 113.706     High  
cufflinks 74.046     High  
cufflinks 133.414     High  
cufflinks 147.804     High  
cufflinks 68.882     High  
cufflinks 80.277     High  
cufflinks 109.19     High  
cufflinks 1.481       Low
cufflinks 86.542     High  
cufflinks 37.288     High  
cufflinks 49.193     High  
cufflinks 63.394     High  
cufflinks 91.075     High  
cufflinks 101.534     High  
cufflinks 114.897     High  
cufflinks 69.616     High  
cufflinks 124.001     High  
cufflinks 88.683     High  
cufflinks 87.427     High  
cufflinks 26.811     High Low

0 Strain