Gene : Bradi3g56610 B. distachyon v3.1
Defline:  (1 of 1) PTHR10766//PTHR10766:SF53 - TRANSMEMBRANE 9 SUPERFAMILY PROTEIN Genomic Order:  7036
Name:  ? Bradi3g56610 Secondary Identifier:  ? PAC:32820658
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g56610 0.5kb upstream 0.5kb upstream 3747 true Bd3: 56195762-56199508 Brachypodium distachyon
Bradi3g56610 0.5kb upstream 0.5kb upstream 500 false Bd3: 56199009-56199508 Brachypodium distachyon
Bradi3g56610 0.5kb downstream 0.5kb downstream 3747 true Bd3: 56195262-56199008 Brachypodium distachyon
Bradi3g56610 0.5kb downstream 0.5kb downstream 500 false Bd3: 56195262-56195761 Brachypodium distachyon
Bradi3g56610 1.0kb upstream 1.0kb upstream 4247 true Bd3: 56195762-56200008 Brachypodium distachyon
Bradi3g56610 1.0kb upstream 1.0kb upstream 1000 false Bd3: 56199009-56200008 Brachypodium distachyon
Bradi3g56610 1.0kb downstream 1.0kb downstream 4247 true Bd3: 56194762-56199008 Brachypodium distachyon
Bradi3g56610 1.0kb downstream 1.0kb downstream 1000 false Bd3: 56194762-56195761 Brachypodium distachyon
Bradi3g56610 2.0kb upstream 2.0kb upstream 5247 true Bd3: 56195762-56201008 Brachypodium distachyon
Bradi3g56610 2.0kb upstream 2.0kb upstream 2000 false Bd3: 56199009-56201008 Brachypodium distachyon
Bradi3g56610 2.0kb downstream 2.0kb downstream 5247 true Bd3: 56193762-56199008 Brachypodium distachyon
Bradi3g56610 2.0kb downstream 2.0kb downstream 2000 false Bd3: 56193762-56195761 Brachypodium distachyon
Bradi3g56610 5.0kb upstream 5.0kb upstream 8247 true Bd3: 56195762-56204008 Brachypodium distachyon
Bradi3g56610 5.0kb upstream 5.0kb upstream 5000 false Bd3: 56199009-56204008 Brachypodium distachyon
Bradi3g56610 5.0kb downstream 5.0kb downstream 8247 true Bd3: 56190762-56199008 Brachypodium distachyon
Bradi3g56610 5.0kb downstream 5.0kb downstream 5000 false Bd3: 56190762-56195761 Brachypodium distachyon
Bradi3g56610 10.0kb upstream 10.0kb upstream 13247 true Bd3: 56195762-56209008 Brachypodium distachyon
Bradi3g56610 10.0kb upstream 10.0kb upstream 10000 false Bd3: 56199009-56209008 Brachypodium distachyon
Bradi3g56610 10.0kb downstream 10.0kb downstream 13247 true Bd3: 56185762-56199008 Brachypodium distachyon
Bradi3g56610 10.0kb downstream 10.0kb downstream 10000 false Bd3: 56185762-56195761 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576681 5269 Grass View MSA
122044185 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.563     High  
cufflinks 25.712     High  
cufflinks 24.411     High  
cufflinks 28.211     High  
cufflinks 15.119     High  
cufflinks 24.504     High  
cufflinks 22.437     High  
cufflinks 29.345     High  
cufflinks 26.134     High  
cufflinks 13.835     High  
cufflinks 9.193     High Low
cufflinks 32.091     High  
cufflinks 9.741     High Low
cufflinks 8.129     High Low
cufflinks 19.331     High  
cufflinks 23.019     High  
cufflinks 25.302     High  
cufflinks 42.645     High High
cufflinks 31.55     High  
cufflinks 6.766       Low
cufflinks 57.638     High High
cufflinks 23.298     High  
cufflinks 32.511     High  
cufflinks 30.654     High  
cufflinks 23.572     High  
cufflinks 21.03     High  
cufflinks 9.425     High Low
cufflinks 16.779     High  
cufflinks 19.344     High  
cufflinks 67.777     High High

0 Strain