Gene : Bradi3g56587 B. distachyon v3.1
Defline:  (1 of 3) PTHR22950//PTHR22950:SF262 - AMINO ACID TRANSPORTER Genomic Order:  7033
Name:  ? Bradi3g56587 Secondary Identifier:  ? PAC:32823181
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g56587 0.5kb upstream 0.5kb upstream 9603 true Bd3: 56180208-56189810 Brachypodium distachyon
Bradi3g56587 0.5kb upstream 0.5kb upstream 500 false Bd3: 56189311-56189810 Brachypodium distachyon
Bradi3g56587 0.5kb downstream 0.5kb downstream 9603 true Bd3: 56179708-56189310 Brachypodium distachyon
Bradi3g56587 0.5kb downstream 0.5kb downstream 500 false Bd3: 56179708-56180207 Brachypodium distachyon
Bradi3g56587 1.0kb upstream 1.0kb upstream 10103 true Bd3: 56180208-56190310 Brachypodium distachyon
Bradi3g56587 1.0kb upstream 1.0kb upstream 1000 false Bd3: 56189311-56190310 Brachypodium distachyon
Bradi3g56587 1.0kb downstream 1.0kb downstream 10103 true Bd3: 56179208-56189310 Brachypodium distachyon
Bradi3g56587 1.0kb downstream 1.0kb downstream 1000 false Bd3: 56179208-56180207 Brachypodium distachyon
Bradi3g56587 2.0kb upstream 2.0kb upstream 11103 true Bd3: 56180208-56191310 Brachypodium distachyon
Bradi3g56587 2.0kb upstream 2.0kb upstream 2000 false Bd3: 56189311-56191310 Brachypodium distachyon
Bradi3g56587 2.0kb downstream 2.0kb downstream 11103 true Bd3: 56178208-56189310 Brachypodium distachyon
Bradi3g56587 2.0kb downstream 2.0kb downstream 2000 false Bd3: 56178208-56180207 Brachypodium distachyon
Bradi3g56587 5.0kb upstream 5.0kb upstream 14103 true Bd3: 56180208-56194310 Brachypodium distachyon
Bradi3g56587 5.0kb upstream 5.0kb upstream 5000 false Bd3: 56189311-56194310 Brachypodium distachyon
Bradi3g56587 5.0kb downstream 5.0kb downstream 14103 true Bd3: 56175208-56189310 Brachypodium distachyon
Bradi3g56587 5.0kb downstream 5.0kb downstream 5000 false Bd3: 56175208-56180207 Brachypodium distachyon
Bradi3g56587 10.0kb upstream 10.0kb upstream 19103 true Bd3: 56180208-56199310 Brachypodium distachyon
Bradi3g56587 10.0kb upstream 10.0kb upstream 10000 false Bd3: 56189311-56199310 Brachypodium distachyon
Bradi3g56587 10.0kb downstream 10.0kb downstream 19103 true Bd3: 56170208-56189310 Brachypodium distachyon
Bradi3g56587 10.0kb downstream 10.0kb downstream 10000 false Bd3: 56170208-56180207 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996093 5273 Angiosperm View MSA
124590625 5269 Grass View MSA
121266266 5274 Embryophyte View MSA
123304609 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.111        
cufflinks 0.135        
cufflinks 0.128        
cufflinks 0.137        
cufflinks 0.076     Low Low
cufflinks 0.168        
cufflinks 0.143        
cufflinks 0.23        
cufflinks 0.197        
cufflinks 0.09     Low Low
cufflinks 0.236        
cufflinks 0.186        
cufflinks 0.254        
cufflinks 0.212        
cufflinks 0.24        
cufflinks 0.109        
cufflinks 0.085     Low Low
cufflinks 0.117     Low  
cufflinks 0.107     Low  
cufflinks 0.174        
cufflinks 0.166        
cufflinks 0.115     Low  
cufflinks 0.204        
cufflinks 0.21        
cufflinks 0.137        
cufflinks 0.143        
cufflinks 0.673       High
cufflinks 0.135        
cufflinks 0.155        
cufflinks 0.137        

0 Strain