Gene : Bradi3g56757 B. distachyon v3.1
Defline:  (1 of 56) KOG0472 - Leucine-rich repeat protein Genomic Order:  7052
Name:  ? Bradi3g56757 Secondary Identifier:  ? PAC:32821280
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g56757 0.5kb upstream 0.5kb upstream 8090 true Bd3: 56291162-56299251 Brachypodium distachyon
Bradi3g56757 0.5kb upstream 0.5kb upstream 500 false Bd3: 56291162-56291661 Brachypodium distachyon
Bradi3g56757 0.5kb downstream 0.5kb downstream 8090 true Bd3: 56291662-56299751 Brachypodium distachyon
Bradi3g56757 0.5kb downstream 0.5kb downstream 500 false Bd3: 56299252-56299751 Brachypodium distachyon
Bradi3g56757 1.0kb upstream 1.0kb upstream 8590 true Bd3: 56290662-56299251 Brachypodium distachyon
Bradi3g56757 1.0kb upstream 1.0kb upstream 1000 false Bd3: 56290662-56291661 Brachypodium distachyon
Bradi3g56757 1.0kb downstream 1.0kb downstream 8590 true Bd3: 56291662-56300251 Brachypodium distachyon
Bradi3g56757 1.0kb downstream 1.0kb downstream 1000 false Bd3: 56299252-56300251 Brachypodium distachyon
Bradi3g56757 2.0kb upstream 2.0kb upstream 9590 true Bd3: 56289662-56299251 Brachypodium distachyon
Bradi3g56757 2.0kb upstream 2.0kb upstream 2000 false Bd3: 56289662-56291661 Brachypodium distachyon
Bradi3g56757 2.0kb downstream 2.0kb downstream 9590 true Bd3: 56291662-56301251 Brachypodium distachyon
Bradi3g56757 2.0kb downstream 2.0kb downstream 2000 false Bd3: 56299252-56301251 Brachypodium distachyon
Bradi3g56757 5.0kb upstream 5.0kb upstream 12590 true Bd3: 56286662-56299251 Brachypodium distachyon
Bradi3g56757 5.0kb upstream 5.0kb upstream 5000 false Bd3: 56286662-56291661 Brachypodium distachyon
Bradi3g56757 5.0kb downstream 5.0kb downstream 12590 true Bd3: 56291662-56304251 Brachypodium distachyon
Bradi3g56757 5.0kb downstream 5.0kb downstream 5000 false Bd3: 56299252-56304251 Brachypodium distachyon
Bradi3g56757 10.0kb upstream 10.0kb upstream 17590 true Bd3: 56281662-56299251 Brachypodium distachyon
Bradi3g56757 10.0kb upstream 10.0kb upstream 10000 false Bd3: 56281662-56291661 Brachypodium distachyon
Bradi3g56757 10.0kb downstream 10.0kb downstream 17590 true Bd3: 56291662-56309251 Brachypodium distachyon
Bradi3g56757 10.0kb downstream 10.0kb downstream 10000 false Bd3: 56299252-56309251 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569810 5269 Grass View MSA
122042195 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121345842 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.6        
cufflinks 3.8        
cufflinks 4.479        
cufflinks 3.346        
cufflinks 2.253       Low
cufflinks 3.437        
cufflinks 3.242        
cufflinks 3.286        
cufflinks 3.428        
cufflinks 3.496        
cufflinks 3.551        
cufflinks 3.138        
cufflinks 2.844        
cufflinks 2.655        
cufflinks 2.11       Low
cufflinks 3.732        
cufflinks 3.094        
cufflinks 5.583       High
cufflinks 4.206        
cufflinks 2.326       Low
cufflinks 3.554        
cufflinks 4.888       High
cufflinks 3.231        
cufflinks 3.182        
cufflinks 3.164        
cufflinks 4.305        
cufflinks 3.542        
cufflinks 4.385        
cufflinks 4.289        
cufflinks 3.827        

0 Strain