Gene : Bradi4g27450 B. distachyon v3.1
Defline:  (1 of 2) 1.1.1.3//2.7.2.4 - Homoserine dehydrogenase // Aspartate kinase / Aspartokinase Genomic Order:  3498
Name:  ? Bradi4g27450 Secondary Identifier:  ? PAC:32789829
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon HOMOSERSYN-PWY Brachypodium distachyon pathologic  
Bdistachyon PWY-3001 Brachypodium distachyon pathologic  
Bdistachyon PWY-5097 Brachypodium distachyon pathologic  
Bdistachyon PWY-724 Brachypodium distachyon pathologic  
Bdistachyon THRESYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g27450 0.5kb upstream 0.5kb upstream 12483 true Bd4: 32498249-32510731 Brachypodium distachyon
Bradi4g27450 0.5kb upstream 0.5kb upstream 500 false Bd4: 32510232-32510731 Brachypodium distachyon
Bradi4g27450 0.5kb downstream 0.5kb downstream 12483 true Bd4: 32497749-32510231 Brachypodium distachyon
Bradi4g27450 0.5kb downstream 0.5kb downstream 500 false Bd4: 32497749-32498248 Brachypodium distachyon
Bradi4g27450 1.0kb upstream 1.0kb upstream 12983 true Bd4: 32498249-32511231 Brachypodium distachyon
Bradi4g27450 1.0kb upstream 1.0kb upstream 1000 false Bd4: 32510232-32511231 Brachypodium distachyon
Bradi4g27450 1.0kb downstream 1.0kb downstream 12983 true Bd4: 32497249-32510231 Brachypodium distachyon
Bradi4g27450 1.0kb downstream 1.0kb downstream 1000 false Bd4: 32497249-32498248 Brachypodium distachyon
Bradi4g27450 2.0kb upstream 2.0kb upstream 13983 true Bd4: 32498249-32512231 Brachypodium distachyon
Bradi4g27450 2.0kb upstream 2.0kb upstream 2000 false Bd4: 32510232-32512231 Brachypodium distachyon
Bradi4g27450 2.0kb downstream 2.0kb downstream 13983 true Bd4: 32496249-32510231 Brachypodium distachyon
Bradi4g27450 2.0kb downstream 2.0kb downstream 2000 false Bd4: 32496249-32498248 Brachypodium distachyon
Bradi4g27450 5.0kb upstream 5.0kb upstream 16983 true Bd4: 32498249-32515231 Brachypodium distachyon
Bradi4g27450 5.0kb upstream 5.0kb upstream 5000 false Bd4: 32510232-32515231 Brachypodium distachyon
Bradi4g27450 5.0kb downstream 5.0kb downstream 16983 true Bd4: 32493249-32510231 Brachypodium distachyon
Bradi4g27450 5.0kb downstream 5.0kb downstream 5000 false Bd4: 32493249-32498248 Brachypodium distachyon
Bradi4g27450 10.0kb upstream 10.0kb upstream 21983 true Bd4: 32498249-32520231 Brachypodium distachyon
Bradi4g27450 10.0kb upstream 10.0kb upstream 10000 false Bd4: 32510232-32520231 Brachypodium distachyon
Bradi4g27450 10.0kb downstream 10.0kb downstream 21983 true Bd4: 32488249-32510231 Brachypodium distachyon
Bradi4g27450 10.0kb downstream 10.0kb downstream 10000 false Bd4: 32488249-32498248 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568844 5269 Grass View MSA
122043013 5273 Angiosperm View MSA
121350238 5274 Embryophyte View MSA
123423775 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.509     High  
cufflinks 22.007     High  
cufflinks 34.4     High  
cufflinks 20.759     High  
cufflinks 14.932     High  
cufflinks 25.778     High  
cufflinks 19.957     High  
cufflinks 24.099     High  
cufflinks 27.455     High  
cufflinks 18.017     High  
cufflinks 43.388     High High
cufflinks 30.252     High  
cufflinks 45.334     High High
cufflinks 47.033     High High
cufflinks 28.617     High  
cufflinks 27.006     High  
cufflinks 15.258     High  
cufflinks 5.706       Low
cufflinks 11.366        
cufflinks 7.766       Low
cufflinks 4.149       Low
cufflinks 36.958     High High
cufflinks 24.815     High  
cufflinks 23.28     High  
cufflinks 18.894     High  
cufflinks 27.767     High  
cufflinks 7.785       Low
cufflinks 25.177     High  
cufflinks 28.682     High  
cufflinks 5.9       Low

0 Strain