Gene : Bradi4g01190 B. distachyon v3.1
Defline:  (1 of 2) PTHR11527//PTHR11527:SF151 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED Genomic Order:  127
Name:  ? Bradi4g01190 Secondary Identifier:  ? PAC:32785884
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g01190 0.5kb upstream 0.5kb upstream 2592 true Bd4: 752405-754996 Brachypodium distachyon
Bradi4g01190 0.5kb upstream 0.5kb upstream 500 false Bd4: 752405-752904 Brachypodium distachyon
Bradi4g01190 0.5kb downstream 0.5kb downstream 2592 true Bd4: 752905-755496 Brachypodium distachyon
Bradi4g01190 0.5kb downstream 0.5kb downstream 500 false Bd4: 754997-755496 Brachypodium distachyon
Bradi4g01190 1.0kb upstream 1.0kb upstream 3092 true Bd4: 751905-754996 Brachypodium distachyon
Bradi4g01190 1.0kb upstream 1.0kb upstream 1000 false Bd4: 751905-752904 Brachypodium distachyon
Bradi4g01190 1.0kb downstream 1.0kb downstream 3092 true Bd4: 752905-755996 Brachypodium distachyon
Bradi4g01190 1.0kb downstream 1.0kb downstream 1000 false Bd4: 754997-755996 Brachypodium distachyon
Bradi4g01190 2.0kb upstream 2.0kb upstream 4092 true Bd4: 750905-754996 Brachypodium distachyon
Bradi4g01190 2.0kb upstream 2.0kb upstream 2000 false Bd4: 750905-752904 Brachypodium distachyon
Bradi4g01190 2.0kb downstream 2.0kb downstream 4092 true Bd4: 752905-756996 Brachypodium distachyon
Bradi4g01190 2.0kb downstream 2.0kb downstream 2000 false Bd4: 754997-756996 Brachypodium distachyon
Bradi4g01190 5.0kb upstream 5.0kb upstream 7092 true Bd4: 747905-754996 Brachypodium distachyon
Bradi4g01190 5.0kb upstream 5.0kb upstream 5000 false Bd4: 747905-752904 Brachypodium distachyon
Bradi4g01190 5.0kb downstream 5.0kb downstream 7092 true Bd4: 752905-759996 Brachypodium distachyon
Bradi4g01190 5.0kb downstream 5.0kb downstream 5000 false Bd4: 754997-759996 Brachypodium distachyon
Bradi4g01190 10.0kb upstream 10.0kb upstream 12092 true Bd4: 742905-754996 Brachypodium distachyon
Bradi4g01190 10.0kb upstream 10.0kb upstream 10000 false Bd4: 742905-752904 Brachypodium distachyon
Bradi4g01190 10.0kb downstream 10.0kb downstream 12092 true Bd4: 752905-764996 Brachypodium distachyon
Bradi4g01190 10.0kb downstream 10.0kb downstream 10000 false Bd4: 754997-764996 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582666 5269 Grass View MSA
122051065 5273 Angiosperm View MSA
121312276 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.329        
cufflinks 0.451        
cufflinks 0.378        
cufflinks 0.204        
cufflinks 0.38        
cufflinks 0.396        
cufflinks 0.691        
cufflinks 0.384        
cufflinks 0.313        
cufflinks 0.432        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.192        
cufflinks 0.027     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.112       Low
cufflinks 0.709        
cufflinks 0.187        
cufflinks 1.013       High
cufflinks 0.411        
cufflinks 0.151        
cufflinks 1.195       High
cufflinks 0.381        
cufflinks 0.58        
cufflinks 0.485        
cufflinks 0.374        
cufflinks 0.403        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.38        
cufflinks 0.487        
cufflinks 1.405       High

0 Strain