Gene : Bradi4g01490 B. distachyon v3.1
Defline:  (1 of 1) PTHR22939//PTHR22939:SF76 - SERINE PROTEASE FAMILY S1C HTRA-RELATED // PROTEASE DO-LIKE 5, CHLOROPLASTIC Genomic Order:  161
Name:  ? Bradi4g01490 Secondary Identifier:  ? PAC:32783423
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g01490 0.5kb upstream 0.5kb upstream 5233 true Bd4: 984583-989815 Brachypodium distachyon
Bradi4g01490 0.5kb upstream 0.5kb upstream 500 false Bd4: 989316-989815 Brachypodium distachyon
Bradi4g01490 0.5kb downstream 0.5kb downstream 5233 true Bd4: 984083-989315 Brachypodium distachyon
Bradi4g01490 0.5kb downstream 0.5kb downstream 500 false Bd4: 984083-984582 Brachypodium distachyon
Bradi4g01490 1.0kb upstream 1.0kb upstream 5733 true Bd4: 984583-990315 Brachypodium distachyon
Bradi4g01490 1.0kb upstream 1.0kb upstream 1000 false Bd4: 989316-990315 Brachypodium distachyon
Bradi4g01490 1.0kb downstream 1.0kb downstream 5733 true Bd4: 983583-989315 Brachypodium distachyon
Bradi4g01490 1.0kb downstream 1.0kb downstream 1000 false Bd4: 983583-984582 Brachypodium distachyon
Bradi4g01490 2.0kb upstream 2.0kb upstream 6733 true Bd4: 984583-991315 Brachypodium distachyon
Bradi4g01490 2.0kb upstream 2.0kb upstream 2000 false Bd4: 989316-991315 Brachypodium distachyon
Bradi4g01490 2.0kb downstream 2.0kb downstream 6733 true Bd4: 982583-989315 Brachypodium distachyon
Bradi4g01490 2.0kb downstream 2.0kb downstream 2000 false Bd4: 982583-984582 Brachypodium distachyon
Bradi4g01490 5.0kb upstream 5.0kb upstream 9733 true Bd4: 984583-994315 Brachypodium distachyon
Bradi4g01490 5.0kb upstream 5.0kb upstream 5000 false Bd4: 989316-994315 Brachypodium distachyon
Bradi4g01490 5.0kb downstream 5.0kb downstream 9733 true Bd4: 979583-989315 Brachypodium distachyon
Bradi4g01490 5.0kb downstream 5.0kb downstream 5000 false Bd4: 979583-984582 Brachypodium distachyon
Bradi4g01490 10.0kb upstream 10.0kb upstream 14733 true Bd4: 984583-999315 Brachypodium distachyon
Bradi4g01490 10.0kb upstream 10.0kb upstream 10000 false Bd4: 989316-999315 Brachypodium distachyon
Bradi4g01490 10.0kb downstream 10.0kb downstream 14733 true Bd4: 974583-989315 Brachypodium distachyon
Bradi4g01490 10.0kb downstream 10.0kb downstream 10000 false Bd4: 974583-984582 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570024 5269 Grass View MSA
122044835 5273 Angiosperm View MSA
121347205 5274 Embryophyte View MSA
123425899 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.62        
cufflinks 1.613        
cufflinks 1.482        
cufflinks 1.607        
cufflinks 0.862        
cufflinks 1.407        
cufflinks 1.632        
cufflinks 1.21        
cufflinks 1.214        
cufflinks 1.596        
cufflinks 1.526        
cufflinks 1.126        
cufflinks 1.196        
cufflinks 1.427        
cufflinks 1.112        
cufflinks 1.474        
cufflinks 1.593        
cufflinks 0.254       Low
cufflinks 1.377        
cufflinks 0.473       Low
cufflinks 0.823        
cufflinks 1.369        
cufflinks 1.161        
cufflinks 1.273        
cufflinks 1.503        
cufflinks 1.617        
cufflinks 1.256        
cufflinks 1.505        
cufflinks 1.347        
cufflinks 0.989        

0 Strain