Gene : Bradi4g01560 B. distachyon v3.1
Defline:  (1 of 2) PTHR10792:SF8 - RIBOSOME BIOGENESIS PROTEIN RLP24-RELATED Genomic Order:  169
Name:  ? Bradi4g01560 Secondary Identifier:  ? PAC:32788298
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g01560 0.5kb upstream 0.5kb upstream 2513 true Bd4: 1040783-1043295 Brachypodium distachyon
Bradi4g01560 0.5kb upstream 0.5kb upstream 500 false Bd4: 1040783-1041282 Brachypodium distachyon
Bradi4g01560 0.5kb downstream 0.5kb downstream 2513 true Bd4: 1041283-1043795 Brachypodium distachyon
Bradi4g01560 0.5kb downstream 0.5kb downstream 500 false Bd4: 1043296-1043795 Brachypodium distachyon
Bradi4g01560 1.0kb upstream 1.0kb upstream 3013 true Bd4: 1040283-1043295 Brachypodium distachyon
Bradi4g01560 1.0kb upstream 1.0kb upstream 1000 false Bd4: 1040283-1041282 Brachypodium distachyon
Bradi4g01560 1.0kb downstream 1.0kb downstream 3013 true Bd4: 1041283-1044295 Brachypodium distachyon
Bradi4g01560 1.0kb downstream 1.0kb downstream 1000 false Bd4: 1043296-1044295 Brachypodium distachyon
Bradi4g01560 2.0kb upstream 2.0kb upstream 4013 true Bd4: 1039283-1043295 Brachypodium distachyon
Bradi4g01560 2.0kb upstream 2.0kb upstream 2000 false Bd4: 1039283-1041282 Brachypodium distachyon
Bradi4g01560 2.0kb downstream 2.0kb downstream 4013 true Bd4: 1041283-1045295 Brachypodium distachyon
Bradi4g01560 2.0kb downstream 2.0kb downstream 2000 false Bd4: 1043296-1045295 Brachypodium distachyon
Bradi4g01560 5.0kb upstream 5.0kb upstream 7013 true Bd4: 1036283-1043295 Brachypodium distachyon
Bradi4g01560 5.0kb upstream 5.0kb upstream 5000 false Bd4: 1036283-1041282 Brachypodium distachyon
Bradi4g01560 5.0kb downstream 5.0kb downstream 7013 true Bd4: 1041283-1048295 Brachypodium distachyon
Bradi4g01560 5.0kb downstream 5.0kb downstream 5000 false Bd4: 1043296-1048295 Brachypodium distachyon
Bradi4g01560 10.0kb upstream 10.0kb upstream 12013 true Bd4: 1031283-1043295 Brachypodium distachyon
Bradi4g01560 10.0kb upstream 10.0kb upstream 10000 false Bd4: 1031283-1041282 Brachypodium distachyon
Bradi4g01560 10.0kb downstream 10.0kb downstream 12013 true Bd4: 1041283-1053295 Brachypodium distachyon
Bradi4g01560 10.0kb downstream 10.0kb downstream 10000 false Bd4: 1043296-1053295 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582722 5269 Grass View MSA
122045898 5273 Angiosperm View MSA
121346492 5274 Embryophyte View MSA
123427829 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.48     High  
cufflinks 28.834     High  
cufflinks 31.743     High  
cufflinks 34.962     High  
cufflinks 38.454     High  
cufflinks 25.518     High  
cufflinks 28.36     High  
cufflinks 24.912     High  
cufflinks 25.248     High  
cufflinks 35.571     High  
cufflinks 10.478     High Low
cufflinks 18.018     High  
cufflinks 6.081       Low
cufflinks 7.919     High Low
cufflinks 17.293     High  
cufflinks 22.301     High  
cufflinks 41.853     High  
cufflinks 41.9     High  
cufflinks 50.302     High High
cufflinks 40.63     High  
cufflinks 49.273     High High
cufflinks 22.913     High  
cufflinks 22.413     High  
cufflinks 23.62     High  
cufflinks 32.087     High  
cufflinks 36.556     High  
cufflinks 11.163     High Low
cufflinks 34.609     High  
cufflinks 30.023     High  
cufflinks 30.557     High  

0 Strain