Gene : Bradi4g25470 B. distachyon v3.1
Defline:  (1 of 10) PF11250 - Fantastic Four meristem regulator (FAF) Genomic Order:  3248
Name:  ? Bradi4g25470 Secondary Identifier:  ? PAC:32788165
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g25470 0.5kb upstream 0.5kb upstream 2764 true Bd4: 30679621-30682384 Brachypodium distachyon
Bradi4g25470 0.5kb upstream 0.5kb upstream 500 false Bd4: 30679621-30680120 Brachypodium distachyon
Bradi4g25470 0.5kb downstream 0.5kb downstream 2764 true Bd4: 30680121-30682884 Brachypodium distachyon
Bradi4g25470 0.5kb downstream 0.5kb downstream 500 false Bd4: 30682385-30682884 Brachypodium distachyon
Bradi4g25470 1.0kb upstream 1.0kb upstream 3264 true Bd4: 30679121-30682384 Brachypodium distachyon
Bradi4g25470 1.0kb upstream 1.0kb upstream 1000 false Bd4: 30679121-30680120 Brachypodium distachyon
Bradi4g25470 1.0kb downstream 1.0kb downstream 3264 true Bd4: 30680121-30683384 Brachypodium distachyon
Bradi4g25470 1.0kb downstream 1.0kb downstream 1000 false Bd4: 30682385-30683384 Brachypodium distachyon
Bradi4g25470 2.0kb upstream 2.0kb upstream 4264 true Bd4: 30678121-30682384 Brachypodium distachyon
Bradi4g25470 2.0kb upstream 2.0kb upstream 2000 false Bd4: 30678121-30680120 Brachypodium distachyon
Bradi4g25470 2.0kb downstream 2.0kb downstream 4264 true Bd4: 30680121-30684384 Brachypodium distachyon
Bradi4g25470 2.0kb downstream 2.0kb downstream 2000 false Bd4: 30682385-30684384 Brachypodium distachyon
Bradi4g25470 5.0kb upstream 5.0kb upstream 7264 true Bd4: 30675121-30682384 Brachypodium distachyon
Bradi4g25470 5.0kb upstream 5.0kb upstream 5000 false Bd4: 30675121-30680120 Brachypodium distachyon
Bradi4g25470 5.0kb downstream 5.0kb downstream 7264 true Bd4: 30680121-30687384 Brachypodium distachyon
Bradi4g25470 5.0kb downstream 5.0kb downstream 5000 false Bd4: 30682385-30687384 Brachypodium distachyon
Bradi4g25470 10.0kb upstream 10.0kb upstream 12264 true Bd4: 30670121-30682384 Brachypodium distachyon
Bradi4g25470 10.0kb upstream 10.0kb upstream 10000 false Bd4: 30670121-30680120 Brachypodium distachyon
Bradi4g25470 10.0kb downstream 10.0kb downstream 12264 true Bd4: 30680121-30692384 Brachypodium distachyon
Bradi4g25470 10.0kb downstream 10.0kb downstream 10000 false Bd4: 30682385-30692384 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545114 5269 Grass View MSA
122048900 5273 Angiosperm View MSA
121311160 5274 Embryophyte View MSA
123348494 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.997        
cufflinks 0.778        
cufflinks 0.741        
cufflinks 1.906        
cufflinks 0.404        
cufflinks 2.648        
cufflinks 1.246        
cufflinks 1.794        
cufflinks 3.56        
cufflinks 0.308        
cufflinks 2.32        
cufflinks 1.07        
cufflinks 4.133       High
cufflinks 5.79       High
cufflinks 2.032        
cufflinks 2.147        
cufflinks 0.621        
cufflinks 0.01     Low Low
cufflinks 0.204       Low
cufflinks 0.063     Low Low
cufflinks 3.043        
cufflinks 0.433        
cufflinks 1.247        
cufflinks 4.041        
cufflinks 4.463       High
cufflinks 0.397        
cufflinks 4.48       High
cufflinks 0.72        
cufflinks 1.402        
cufflinks 0.582        

0 Strain