Gene : Bradi4g02070 B. distachyon v3.1
Defline:  (1 of 1) PTHR12496 - CGI-41 METHYLTRANSFERASE Genomic Order:  231
Name:  ? Bradi4g02070 Secondary Identifier:  ? PAC:32791405
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g02070 0.5kb upstream 0.5kb upstream 6642 true Bd4: 1352255-1358896 Brachypodium distachyon
Bradi4g02070 0.5kb upstream 0.5kb upstream 500 false Bd4: 1358397-1358896 Brachypodium distachyon
Bradi4g02070 0.5kb downstream 0.5kb downstream 6642 true Bd4: 1351755-1358396 Brachypodium distachyon
Bradi4g02070 0.5kb downstream 0.5kb downstream 500 false Bd4: 1351755-1352254 Brachypodium distachyon
Bradi4g02070 1.0kb upstream 1.0kb upstream 7142 true Bd4: 1352255-1359396 Brachypodium distachyon
Bradi4g02070 1.0kb upstream 1.0kb upstream 1000 false Bd4: 1358397-1359396 Brachypodium distachyon
Bradi4g02070 1.0kb downstream 1.0kb downstream 7142 true Bd4: 1351255-1358396 Brachypodium distachyon
Bradi4g02070 1.0kb downstream 1.0kb downstream 1000 false Bd4: 1351255-1352254 Brachypodium distachyon
Bradi4g02070 2.0kb upstream 2.0kb upstream 8142 true Bd4: 1352255-1360396 Brachypodium distachyon
Bradi4g02070 2.0kb upstream 2.0kb upstream 2000 false Bd4: 1358397-1360396 Brachypodium distachyon
Bradi4g02070 2.0kb downstream 2.0kb downstream 8142 true Bd4: 1350255-1358396 Brachypodium distachyon
Bradi4g02070 2.0kb downstream 2.0kb downstream 2000 false Bd4: 1350255-1352254 Brachypodium distachyon
Bradi4g02070 5.0kb upstream 5.0kb upstream 11142 true Bd4: 1352255-1363396 Brachypodium distachyon
Bradi4g02070 5.0kb upstream 5.0kb upstream 5000 false Bd4: 1358397-1363396 Brachypodium distachyon
Bradi4g02070 5.0kb downstream 5.0kb downstream 11142 true Bd4: 1347255-1358396 Brachypodium distachyon
Bradi4g02070 5.0kb downstream 5.0kb downstream 5000 false Bd4: 1347255-1352254 Brachypodium distachyon
Bradi4g02070 10.0kb upstream 10.0kb upstream 16142 true Bd4: 1352255-1368396 Brachypodium distachyon
Bradi4g02070 10.0kb upstream 10.0kb upstream 10000 false Bd4: 1358397-1368396 Brachypodium distachyon
Bradi4g02070 10.0kb downstream 10.0kb downstream 16142 true Bd4: 1342255-1358396 Brachypodium distachyon
Bradi4g02070 10.0kb downstream 10.0kb downstream 10000 false Bd4: 1342255-1352254 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041435 5273 Angiosperm View MSA
124574700 5269 Grass View MSA
121344340 5274 Embryophyte View MSA
123380024 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.329        
cufflinks 2.153        
cufflinks 2.79       High
cufflinks 1.981        
cufflinks 0.947       Low
cufflinks 1.909        
cufflinks 1.865        
cufflinks 1.378        
cufflinks 1.642        
cufflinks 2.209        
cufflinks 1.858        
cufflinks 1.788        
cufflinks 1.552        
cufflinks 1.522        
cufflinks 1.018       Low
cufflinks 1.9        
cufflinks 1.208        
cufflinks 2.451        
cufflinks 2.281        
cufflinks 0.588       Low
cufflinks 1.615        
cufflinks 2.865       High
cufflinks 1.558        
cufflinks 1.421        
cufflinks 1.685        
cufflinks 3.245       High
cufflinks 1.47        
cufflinks 3.415       High
cufflinks 2.885       High
cufflinks 1.989        

0 Strain