Gene : Bradi4g02450 B. distachyon v3.1
Defline:  (1 of 1) PTHR11649:SF64 - PROTEIN ROOT HAIR DEFECTIVE 3 HOMOLOG 1 Genomic Order:  280
Name:  ? Bradi4g02450 Secondary Identifier:  ? PAC:32783569
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g02450 0.5kb upstream 0.5kb upstream 10358 true Bd4: 1611974-1622331 Brachypodium distachyon
Bradi4g02450 0.5kb upstream 0.5kb upstream 500 false Bd4: 1621832-1622331 Brachypodium distachyon
Bradi4g02450 0.5kb downstream 0.5kb downstream 10358 true Bd4: 1611474-1621831 Brachypodium distachyon
Bradi4g02450 0.5kb downstream 0.5kb downstream 500 false Bd4: 1611474-1611973 Brachypodium distachyon
Bradi4g02450 1.0kb upstream 1.0kb upstream 10858 true Bd4: 1611974-1622831 Brachypodium distachyon
Bradi4g02450 1.0kb upstream 1.0kb upstream 1000 false Bd4: 1621832-1622831 Brachypodium distachyon
Bradi4g02450 1.0kb downstream 1.0kb downstream 10858 true Bd4: 1610974-1621831 Brachypodium distachyon
Bradi4g02450 1.0kb downstream 1.0kb downstream 1000 false Bd4: 1610974-1611973 Brachypodium distachyon
Bradi4g02450 2.0kb upstream 2.0kb upstream 11858 true Bd4: 1611974-1623831 Brachypodium distachyon
Bradi4g02450 2.0kb upstream 2.0kb upstream 2000 false Bd4: 1621832-1623831 Brachypodium distachyon
Bradi4g02450 2.0kb downstream 2.0kb downstream 11858 true Bd4: 1609974-1621831 Brachypodium distachyon
Bradi4g02450 2.0kb downstream 2.0kb downstream 2000 false Bd4: 1609974-1611973 Brachypodium distachyon
Bradi4g02450 5.0kb upstream 5.0kb upstream 14858 true Bd4: 1611974-1626831 Brachypodium distachyon
Bradi4g02450 5.0kb upstream 5.0kb upstream 5000 false Bd4: 1621832-1626831 Brachypodium distachyon
Bradi4g02450 5.0kb downstream 5.0kb downstream 14858 true Bd4: 1606974-1621831 Brachypodium distachyon
Bradi4g02450 5.0kb downstream 5.0kb downstream 5000 false Bd4: 1606974-1611973 Brachypodium distachyon
Bradi4g02450 10.0kb upstream 10.0kb upstream 19858 true Bd4: 1611974-1631831 Brachypodium distachyon
Bradi4g02450 10.0kb upstream 10.0kb upstream 10000 false Bd4: 1621832-1631831 Brachypodium distachyon
Bradi4g02450 10.0kb downstream 10.0kb downstream 19858 true Bd4: 1601974-1621831 Brachypodium distachyon
Bradi4g02450 10.0kb downstream 10.0kb downstream 10000 false Bd4: 1601974-1611973 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580491 5269 Grass View MSA
122048345 5273 Angiosperm View MSA
121345089 5274 Embryophyte View MSA
123427050 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.039     Low  
cufflinks 0.045     Low  
cufflinks 0.039     Low  
cufflinks 0.039     Low  
cufflinks 0.015     Low  
cufflinks 0.039     Low  
cufflinks 0.035     Low  
cufflinks 0.03     Low  
cufflinks 0.022     Low  
cufflinks 0.011     Low  
cufflinks 0.004     Low Low
cufflinks 0.047     Low  
cufflinks 0.002     Low Low
cufflinks 0.001     Low Low
cufflinks 0.024     Low  
cufflinks 0.045     Low  
cufflinks 0.05     Low  
cufflinks 0.085     Low  
cufflinks 0.108     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.159       High
cufflinks 0.055     Low  
cufflinks 0.035     Low  
cufflinks 0.041     Low  
cufflinks 0.041     Low  
cufflinks 0.05     Low  
cufflinks 0.013     Low  
cufflinks 0.032     Low  
cufflinks 0.024     Low  
cufflinks 0.141       High

0 Strain