Gene : Bradi3g60190 B. distachyon v3.1
Defline:  (1 of 1) K03351 - anaphase-promoting complex subunit 4 (APC4) Genomic Order:  7455
Name:  ? Bradi3g60190 Secondary Identifier:  ? PAC:32816290
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g60190 0.5kb upstream 0.5kb upstream 8000 true Bd3: 58957320-58965319 Brachypodium distachyon
Bradi3g60190 0.5kb upstream 0.5kb upstream 500 false Bd3: 58957320-58957819 Brachypodium distachyon
Bradi3g60190 0.5kb downstream 0.5kb downstream 8000 true Bd3: 58957820-58965819 Brachypodium distachyon
Bradi3g60190 0.5kb downstream 0.5kb downstream 500 false Bd3: 58965320-58965819 Brachypodium distachyon
Bradi3g60190 1.0kb upstream 1.0kb upstream 8500 true Bd3: 58956820-58965319 Brachypodium distachyon
Bradi3g60190 1.0kb upstream 1.0kb upstream 1000 false Bd3: 58956820-58957819 Brachypodium distachyon
Bradi3g60190 1.0kb downstream 1.0kb downstream 8500 true Bd3: 58957820-58966319 Brachypodium distachyon
Bradi3g60190 1.0kb downstream 1.0kb downstream 1000 false Bd3: 58965320-58966319 Brachypodium distachyon
Bradi3g60190 2.0kb upstream 2.0kb upstream 9500 true Bd3: 58955820-58965319 Brachypodium distachyon
Bradi3g60190 2.0kb upstream 2.0kb upstream 2000 false Bd3: 58955820-58957819 Brachypodium distachyon
Bradi3g60190 2.0kb downstream 2.0kb downstream 9500 true Bd3: 58957820-58967319 Brachypodium distachyon
Bradi3g60190 2.0kb downstream 2.0kb downstream 2000 false Bd3: 58965320-58967319 Brachypodium distachyon
Bradi3g60190 5.0kb upstream 5.0kb upstream 12500 true Bd3: 58952820-58965319 Brachypodium distachyon
Bradi3g60190 5.0kb upstream 5.0kb upstream 5000 false Bd3: 58952820-58957819 Brachypodium distachyon
Bradi3g60190 5.0kb downstream 5.0kb downstream 12500 true Bd3: 58957820-58970319 Brachypodium distachyon
Bradi3g60190 5.0kb downstream 5.0kb downstream 5000 false Bd3: 58965320-58970319 Brachypodium distachyon
Bradi3g60190 10.0kb upstream 10.0kb upstream 17500 true Bd3: 58947820-58965319 Brachypodium distachyon
Bradi3g60190 10.0kb upstream 10.0kb upstream 10000 false Bd3: 58947820-58957819 Brachypodium distachyon
Bradi3g60190 10.0kb downstream 10.0kb downstream 17500 true Bd3: 58957820-58975319 Brachypodium distachyon
Bradi3g60190 10.0kb downstream 10.0kb downstream 10000 false Bd3: 58965320-58975319 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574744 5269 Grass View MSA
122042900 5273 Angiosperm View MSA
121345416 5274 Embryophyte View MSA
123423940 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.655        
cufflinks 1.177       High
cufflinks 1.124       High
cufflinks 0.81        
cufflinks 0.32        
cufflinks 0.787        
cufflinks 0.835        
cufflinks 0.584        
cufflinks 0.64        
cufflinks 0.408        
cufflinks 0.152       Low
cufflinks 0.61        
cufflinks 0.075       Low
cufflinks 0.065       Low
cufflinks 0.19        
cufflinks 0.852        
cufflinks 0.303        
cufflinks 1.445       High
cufflinks 0.568        
cufflinks 0.053     Low Low
cufflinks 0.432        
cufflinks 0.94        
cufflinks 0.5        
cufflinks 0.52        
cufflinks 0.704        
cufflinks 0.808        
cufflinks 0.089     Low Low
cufflinks 0.723        
cufflinks 0.737        
cufflinks 0.878        

0 Strain