Gene : Bradi3g60820 B. distachyon v3.1
Defline:  (1 of 1) 2.4.1.101 - Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase / 1,2-N-acetylglucosaminyltransferase Genomic Order:  7534
Name:  ? Bradi3g60820 Secondary Identifier:  ? PAC:32819720
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7426 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g60820 0.5kb upstream 0.5kb upstream 5754 true Bd3: 59389368-59395121 Brachypodium distachyon
Bradi3g60820 0.5kb upstream 0.5kb upstream 500 false Bd3: 59394622-59395121 Brachypodium distachyon
Bradi3g60820 0.5kb downstream 0.5kb downstream 5754 true Bd3: 59388868-59394621 Brachypodium distachyon
Bradi3g60820 0.5kb downstream 0.5kb downstream 500 false Bd3: 59388868-59389367 Brachypodium distachyon
Bradi3g60820 1.0kb upstream 1.0kb upstream 6254 true Bd3: 59389368-59395621 Brachypodium distachyon
Bradi3g60820 1.0kb upstream 1.0kb upstream 1000 false Bd3: 59394622-59395621 Brachypodium distachyon
Bradi3g60820 1.0kb downstream 1.0kb downstream 6254 true Bd3: 59388368-59394621 Brachypodium distachyon
Bradi3g60820 1.0kb downstream 1.0kb downstream 1000 false Bd3: 59388368-59389367 Brachypodium distachyon
Bradi3g60820 2.0kb upstream 2.0kb upstream 7254 true Bd3: 59389368-59396621 Brachypodium distachyon
Bradi3g60820 2.0kb upstream 2.0kb upstream 2000 false Bd3: 59394622-59396621 Brachypodium distachyon
Bradi3g60820 2.0kb downstream 2.0kb downstream 7254 true Bd3: 59387368-59394621 Brachypodium distachyon
Bradi3g60820 2.0kb downstream 2.0kb downstream 2000 false Bd3: 59387368-59389367 Brachypodium distachyon
Bradi3g60820 5.0kb upstream 5.0kb upstream 10254 true Bd3: 59389368-59399621 Brachypodium distachyon
Bradi3g60820 5.0kb upstream 5.0kb upstream 5000 false Bd3: 59394622-59399621 Brachypodium distachyon
Bradi3g60820 5.0kb downstream 5.0kb downstream 10254 true Bd3: 59384368-59394621 Brachypodium distachyon
Bradi3g60820 5.0kb downstream 5.0kb downstream 5000 false Bd3: 59384368-59389367 Brachypodium distachyon
Bradi3g60820 10.0kb upstream 10.0kb upstream 15254 true Bd3: 59389368-59404621 Brachypodium distachyon
Bradi3g60820 10.0kb upstream 10.0kb upstream 10000 false Bd3: 59394622-59404621 Brachypodium distachyon
Bradi3g60820 10.0kb downstream 10.0kb downstream 15254 true Bd3: 59379368-59394621 Brachypodium distachyon
Bradi3g60820 10.0kb downstream 10.0kb downstream 10000 false Bd3: 59379368-59389367 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574164 5269 Grass View MSA
122050416 5273 Angiosperm View MSA
121350019 5274 Embryophyte View MSA
123426685 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.087        
cufflinks 4.942        
cufflinks 5.97        
cufflinks 4.876        
cufflinks 3.379       Low
cufflinks 4.973        
cufflinks 5.005        
cufflinks 4.484        
cufflinks 5.187        
cufflinks 5.056        
cufflinks 6.298        
cufflinks 4.116        
cufflinks 4.469        
cufflinks 4.442        
cufflinks 3.791        
cufflinks 5.011        
cufflinks 5.717        
cufflinks 7.812       High
cufflinks 8.918       High
cufflinks 2.793       Low
cufflinks 6.066        
cufflinks 6.59        
cufflinks 4.33        
cufflinks 4.77        
cufflinks 4.891        
cufflinks 5.885        
cufflinks 6.05        
cufflinks 6.512        
cufflinks 5.646        
cufflinks 5.347        

0 Strain