Gene : Bradi3g60837 B. distachyon v3.1
Defline:  (1 of 1) PTHR23306:SF3 - TUMOR SUPPRESSOR PROTEIN 101 Genomic Order:  7536
Name:  ? Bradi3g60837 Secondary Identifier:  ? PAC:32817033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g60837 0.5kb upstream 0.5kb upstream 4122 true Bd3: 59406649-59410770 Brachypodium distachyon
Bradi3g60837 0.5kb upstream 0.5kb upstream 500 false Bd3: 59406649-59407148 Brachypodium distachyon
Bradi3g60837 0.5kb downstream 0.5kb downstream 4122 true Bd3: 59407149-59411270 Brachypodium distachyon
Bradi3g60837 0.5kb downstream 0.5kb downstream 500 false Bd3: 59410771-59411270 Brachypodium distachyon
Bradi3g60837 1.0kb upstream 1.0kb upstream 4622 true Bd3: 59406149-59410770 Brachypodium distachyon
Bradi3g60837 1.0kb upstream 1.0kb upstream 1000 false Bd3: 59406149-59407148 Brachypodium distachyon
Bradi3g60837 1.0kb downstream 1.0kb downstream 4622 true Bd3: 59407149-59411770 Brachypodium distachyon
Bradi3g60837 1.0kb downstream 1.0kb downstream 1000 false Bd3: 59410771-59411770 Brachypodium distachyon
Bradi3g60837 2.0kb upstream 2.0kb upstream 5622 true Bd3: 59405149-59410770 Brachypodium distachyon
Bradi3g60837 2.0kb upstream 2.0kb upstream 2000 false Bd3: 59405149-59407148 Brachypodium distachyon
Bradi3g60837 2.0kb downstream 2.0kb downstream 5622 true Bd3: 59407149-59412770 Brachypodium distachyon
Bradi3g60837 2.0kb downstream 2.0kb downstream 2000 false Bd3: 59410771-59412770 Brachypodium distachyon
Bradi3g60837 5.0kb upstream 5.0kb upstream 8622 true Bd3: 59402149-59410770 Brachypodium distachyon
Bradi3g60837 5.0kb upstream 5.0kb upstream 5000 false Bd3: 59402149-59407148 Brachypodium distachyon
Bradi3g60837 5.0kb downstream 5.0kb downstream 8622 true Bd3: 59407149-59415770 Brachypodium distachyon
Bradi3g60837 5.0kb downstream 5.0kb downstream 5000 false Bd3: 59410771-59415770 Brachypodium distachyon
Bradi3g60837 10.0kb upstream 10.0kb upstream 13622 true Bd3: 59397149-59410770 Brachypodium distachyon
Bradi3g60837 10.0kb upstream 10.0kb upstream 10000 false Bd3: 59397149-59407148 Brachypodium distachyon
Bradi3g60837 10.0kb downstream 10.0kb downstream 13622 true Bd3: 59407149-59420770 Brachypodium distachyon
Bradi3g60837 10.0kb downstream 10.0kb downstream 10000 false Bd3: 59410771-59420770 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589689 5269 Grass View MSA
122050424 5273 Angiosperm View MSA
121347695 5274 Embryophyte View MSA
123427966 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.726        
cufflinks 0.896        
cufflinks 1.076        
cufflinks 0.737        
cufflinks 0.625        
cufflinks 0.852        
cufflinks 1.032        
cufflinks 1.006        
cufflinks 0.889        
cufflinks 0.873        
cufflinks 0.57       Low
cufflinks 0.808        
cufflinks 0.516       Low
cufflinks 0.478       Low
cufflinks 0.653        
cufflinks 0.853        
cufflinks 0.618        
cufflinks 1.665       High
cufflinks 1.36       High
cufflinks 1.728       High
cufflinks 1.632       High
cufflinks 0.952        
cufflinks 0.915        
cufflinks 0.733        
cufflinks 0.698        
cufflinks 0.836        
cufflinks 0.599        
cufflinks 0.936        
cufflinks 0.985        
cufflinks 1.115        

0 Strain