Gene : Bradi3g60860 B. distachyon v3.1
Defline:  (1 of 2) PTHR32468//PTHR32468:SF28 - FAMILY NOT NAMED // CATION/H(+) ANTIPORTER 1-RELATED Genomic Order:  7538
Name:  ? Bradi3g60860 Secondary Identifier:  ? PAC:32818827
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g60860 0.5kb upstream 0.5kb upstream 3273 true Bd3: 59415691-59418963 Brachypodium distachyon
Bradi3g60860 0.5kb upstream 0.5kb upstream 500 false Bd3: 59415691-59416190 Brachypodium distachyon
Bradi3g60860 0.5kb downstream 0.5kb downstream 3273 true Bd3: 59416191-59419463 Brachypodium distachyon
Bradi3g60860 0.5kb downstream 0.5kb downstream 500 false Bd3: 59418964-59419463 Brachypodium distachyon
Bradi3g60860 1.0kb upstream 1.0kb upstream 3773 true Bd3: 59415191-59418963 Brachypodium distachyon
Bradi3g60860 1.0kb upstream 1.0kb upstream 1000 false Bd3: 59415191-59416190 Brachypodium distachyon
Bradi3g60860 1.0kb downstream 1.0kb downstream 3773 true Bd3: 59416191-59419963 Brachypodium distachyon
Bradi3g60860 1.0kb downstream 1.0kb downstream 1000 false Bd3: 59418964-59419963 Brachypodium distachyon
Bradi3g60860 2.0kb upstream 2.0kb upstream 4773 true Bd3: 59414191-59418963 Brachypodium distachyon
Bradi3g60860 2.0kb upstream 2.0kb upstream 2000 false Bd3: 59414191-59416190 Brachypodium distachyon
Bradi3g60860 2.0kb downstream 2.0kb downstream 4773 true Bd3: 59416191-59420963 Brachypodium distachyon
Bradi3g60860 2.0kb downstream 2.0kb downstream 2000 false Bd3: 59418964-59420963 Brachypodium distachyon
Bradi3g60860 5.0kb upstream 5.0kb upstream 7773 true Bd3: 59411191-59418963 Brachypodium distachyon
Bradi3g60860 5.0kb upstream 5.0kb upstream 5000 false Bd3: 59411191-59416190 Brachypodium distachyon
Bradi3g60860 5.0kb downstream 5.0kb downstream 7773 true Bd3: 59416191-59423963 Brachypodium distachyon
Bradi3g60860 5.0kb downstream 5.0kb downstream 5000 false Bd3: 59418964-59423963 Brachypodium distachyon
Bradi3g60860 10.0kb upstream 10.0kb upstream 12773 true Bd3: 59406191-59418963 Brachypodium distachyon
Bradi3g60860 10.0kb upstream 10.0kb upstream 10000 false Bd3: 59406191-59416190 Brachypodium distachyon
Bradi3g60860 10.0kb downstream 10.0kb downstream 12773 true Bd3: 59416191-59428963 Brachypodium distachyon
Bradi3g60860 10.0kb downstream 10.0kb downstream 10000 false Bd3: 59418964-59428963 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579607 5269 Grass View MSA
122048116 5273 Angiosperm View MSA
121310852 5274 Embryophyte View MSA
123348237 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.005     Low Low
cufflinks 0.03     Low  
cufflinks 0.019     Low  
cufflinks 0.023     Low  
cufflinks 0.007     Low  
cufflinks 0.018     Low  
cufflinks 0.006     Low Low
cufflinks 0.006     Low Low
cufflinks 0.011     Low  
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.013     Low  
cufflinks 0.03     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.008     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.185       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.033     Low  
cufflinks 0.025     Low  
cufflinks 0.008     Low  
cufflinks 0.018     Low  
cufflinks 0.024     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low  

0 Strain