Gene : Bradi4g00350 B. distachyon v3.1
Defline:  (1 of 66) PF01357 - Pollen allergen (Pollen_allerg_1) Genomic Order:  22
Name:  ? Bradi4g00350 Secondary Identifier:  ? PAC:32787663
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g00350 0.5kb upstream 0.5kb upstream 1277 true Bd4: 148905-150181 Brachypodium distachyon
Bradi4g00350 0.5kb upstream 0.5kb upstream 500 false Bd4: 148905-149404 Brachypodium distachyon
Bradi4g00350 0.5kb downstream 0.5kb downstream 1277 true Bd4: 149405-150681 Brachypodium distachyon
Bradi4g00350 0.5kb downstream 0.5kb downstream 500 false Bd4: 150182-150681 Brachypodium distachyon
Bradi4g00350 1.0kb upstream 1.0kb upstream 1777 true Bd4: 148405-150181 Brachypodium distachyon
Bradi4g00350 1.0kb upstream 1.0kb upstream 1000 false Bd4: 148405-149404 Brachypodium distachyon
Bradi4g00350 1.0kb downstream 1.0kb downstream 1777 true Bd4: 149405-151181 Brachypodium distachyon
Bradi4g00350 1.0kb downstream 1.0kb downstream 1000 false Bd4: 150182-151181 Brachypodium distachyon
Bradi4g00350 2.0kb upstream 2.0kb upstream 2777 true Bd4: 147405-150181 Brachypodium distachyon
Bradi4g00350 2.0kb upstream 2.0kb upstream 2000 false Bd4: 147405-149404 Brachypodium distachyon
Bradi4g00350 2.0kb downstream 2.0kb downstream 2777 true Bd4: 149405-152181 Brachypodium distachyon
Bradi4g00350 2.0kb downstream 2.0kb downstream 2000 false Bd4: 150182-152181 Brachypodium distachyon
Bradi4g00350 5.0kb upstream 5.0kb upstream 5777 true Bd4: 144405-150181 Brachypodium distachyon
Bradi4g00350 5.0kb upstream 5.0kb upstream 5000 false Bd4: 144405-149404 Brachypodium distachyon
Bradi4g00350 5.0kb downstream 5.0kb downstream 5777 true Bd4: 149405-155181 Brachypodium distachyon
Bradi4g00350 5.0kb downstream 5.0kb downstream 5000 false Bd4: 150182-155181 Brachypodium distachyon
Bradi4g00350 10.0kb upstream 10.0kb upstream 10777 true Bd4: 139405-150181 Brachypodium distachyon
Bradi4g00350 10.0kb upstream 10.0kb upstream 10000 false Bd4: 139405-149404 Brachypodium distachyon
Bradi4g00350 10.0kb downstream 10.0kb downstream 10777 true Bd4: 149405-160181 Brachypodium distachyon
Bradi4g00350 10.0kb downstream 10.0kb downstream 10000 false Bd4: 150182-160181 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121996156 5273 Angiosperm View MSA
124590797 5269 Grass View MSA
121266324 5274 Embryophyte View MSA
123304666 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.183        
cufflinks 0.046     Low  
cufflinks 0.128        
cufflinks 0.097     Low  
cufflinks 0.141        
cufflinks 0.052     Low  
cufflinks 0.086        
cufflinks 0.025     Low Low
cufflinks 0.098     Low  
cufflinks 0.02     Low Low
cufflinks 0.023     Low Low
cufflinks 0.101        
cufflinks 0.029     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.229        
cufflinks 0.124        
cufflinks 0.196        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.085     Low  
cufflinks 1.539       High
cufflinks 0.625       High
cufflinks 0.041     Low  
cufflinks 0.04     Low  
cufflinks 0.116        
cufflinks 0.08     Low  
cufflinks 0.106     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.117        
cufflinks 0.144        
cufflinks 0.455       High

0 Strain