Gene : Bradi4g00640 B. distachyon v3.1
Defline:  (1 of 3) 1.14.13.39 - Nitric-oxide synthase (NADPH) / NO synthase Genomic Order:  56
Name:  ? Bradi4g00640 Secondary Identifier:  ? PAC:32790389
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6845 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g00640 0.5kb upstream 0.5kb upstream 3694 true Bd4: 295693-299386 Brachypodium distachyon
Bradi4g00640 0.5kb upstream 0.5kb upstream 500 false Bd4: 295693-296192 Brachypodium distachyon
Bradi4g00640 0.5kb downstream 0.5kb downstream 3694 true Bd4: 296193-299886 Brachypodium distachyon
Bradi4g00640 0.5kb downstream 0.5kb downstream 500 false Bd4: 299387-299886 Brachypodium distachyon
Bradi4g00640 1.0kb upstream 1.0kb upstream 4194 true Bd4: 295193-299386 Brachypodium distachyon
Bradi4g00640 1.0kb upstream 1.0kb upstream 1000 false Bd4: 295193-296192 Brachypodium distachyon
Bradi4g00640 1.0kb downstream 1.0kb downstream 4194 true Bd4: 296193-300386 Brachypodium distachyon
Bradi4g00640 1.0kb downstream 1.0kb downstream 1000 false Bd4: 299387-300386 Brachypodium distachyon
Bradi4g00640 2.0kb upstream 2.0kb upstream 5194 true Bd4: 294193-299386 Brachypodium distachyon
Bradi4g00640 2.0kb upstream 2.0kb upstream 2000 false Bd4: 294193-296192 Brachypodium distachyon
Bradi4g00640 2.0kb downstream 2.0kb downstream 5194 true Bd4: 296193-301386 Brachypodium distachyon
Bradi4g00640 2.0kb downstream 2.0kb downstream 2000 false Bd4: 299387-301386 Brachypodium distachyon
Bradi4g00640 5.0kb upstream 5.0kb upstream 8194 true Bd4: 291193-299386 Brachypodium distachyon
Bradi4g00640 5.0kb upstream 5.0kb upstream 5000 false Bd4: 291193-296192 Brachypodium distachyon
Bradi4g00640 5.0kb downstream 5.0kb downstream 8194 true Bd4: 296193-304386 Brachypodium distachyon
Bradi4g00640 5.0kb downstream 5.0kb downstream 5000 false Bd4: 299387-304386 Brachypodium distachyon
Bradi4g00640 10.0kb upstream 10.0kb upstream 13194 true Bd4: 286193-299386 Brachypodium distachyon
Bradi4g00640 10.0kb upstream 10.0kb upstream 10000 false Bd4: 286193-296192 Brachypodium distachyon
Bradi4g00640 10.0kb downstream 10.0kb downstream 13194 true Bd4: 296193-309386 Brachypodium distachyon
Bradi4g00640 10.0kb downstream 10.0kb downstream 10000 false Bd4: 299387-309386 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124568372 5269 Grass View MSA
122044948 5273 Angiosperm View MSA
121347878 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.897     High  
cufflinks 31.181     High High
cufflinks 32.001     High High
cufflinks 24.963     High  
cufflinks 7.687        
cufflinks 22.75     High  
cufflinks 26.998     High  
cufflinks 16.355     High  
cufflinks 18.949     High  
cufflinks 16.75     High  
cufflinks 23.005     High  
cufflinks 21.158     High  
cufflinks 13.323     High  
cufflinks 16.818     High  
cufflinks 11.946     High  
cufflinks 27.507     High  
cufflinks 12.076     High  
cufflinks 4.542       Low
cufflinks 8.917        
cufflinks 0.799       Low
cufflinks 10.402        
cufflinks 21.666     High  
cufflinks 14.585     High  
cufflinks 16.482     High  
cufflinks 21.287     High  
cufflinks 24.527     High  
cufflinks 8.981     High  
cufflinks 23.818     High  
cufflinks 22.796     High  
cufflinks 24.223     High  

0 Strain