Gene : Bradi4g01080 B. distachyon v3.1
Defline:  (1 of 1) PTHR12687:SF8 - NOC2P FAMILY PROTEIN Genomic Order:  114
Name:  ? Bradi4g01080 Secondary Identifier:  ? PAC:32785665
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g01080 0.5kb upstream 0.5kb upstream 7849 true Bd4: 658438-666286 Brachypodium distachyon
Bradi4g01080 0.5kb upstream 0.5kb upstream 500 false Bd4: 658438-658937 Brachypodium distachyon
Bradi4g01080 0.5kb downstream 0.5kb downstream 7849 true Bd4: 658938-666786 Brachypodium distachyon
Bradi4g01080 0.5kb downstream 0.5kb downstream 500 false Bd4: 666287-666786 Brachypodium distachyon
Bradi4g01080 1.0kb upstream 1.0kb upstream 8349 true Bd4: 657938-666286 Brachypodium distachyon
Bradi4g01080 1.0kb upstream 1.0kb upstream 1000 false Bd4: 657938-658937 Brachypodium distachyon
Bradi4g01080 1.0kb downstream 1.0kb downstream 8349 true Bd4: 658938-667286 Brachypodium distachyon
Bradi4g01080 1.0kb downstream 1.0kb downstream 1000 false Bd4: 666287-667286 Brachypodium distachyon
Bradi4g01080 2.0kb upstream 2.0kb upstream 9349 true Bd4: 656938-666286 Brachypodium distachyon
Bradi4g01080 2.0kb upstream 2.0kb upstream 2000 false Bd4: 656938-658937 Brachypodium distachyon
Bradi4g01080 2.0kb downstream 2.0kb downstream 9349 true Bd4: 658938-668286 Brachypodium distachyon
Bradi4g01080 2.0kb downstream 2.0kb downstream 2000 false Bd4: 666287-668286 Brachypodium distachyon
Bradi4g01080 5.0kb upstream 5.0kb upstream 12349 true Bd4: 653938-666286 Brachypodium distachyon
Bradi4g01080 5.0kb upstream 5.0kb upstream 5000 false Bd4: 653938-658937 Brachypodium distachyon
Bradi4g01080 5.0kb downstream 5.0kb downstream 12349 true Bd4: 658938-671286 Brachypodium distachyon
Bradi4g01080 5.0kb downstream 5.0kb downstream 5000 false Bd4: 666287-671286 Brachypodium distachyon
Bradi4g01080 10.0kb upstream 10.0kb upstream 17349 true Bd4: 648938-666286 Brachypodium distachyon
Bradi4g01080 10.0kb upstream 10.0kb upstream 10000 false Bd4: 648938-658937 Brachypodium distachyon
Bradi4g01080 10.0kb downstream 10.0kb downstream 17349 true Bd4: 658938-676286 Brachypodium distachyon
Bradi4g01080 10.0kb downstream 10.0kb downstream 10000 false Bd4: 666287-676286 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569504 5269 Grass View MSA
122046727 5273 Angiosperm View MSA
121344476 5274 Embryophyte View MSA
123425551 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.8        
cufflinks 2.782        
cufflinks 1.954        
cufflinks 2.694        
cufflinks 0.616       Low
cufflinks 2.501        
cufflinks 2.147        
cufflinks 1.684        
cufflinks 1.934        
cufflinks 1.164        
cufflinks 0.576       Low
cufflinks 1.687        
cufflinks 0.492       Low
cufflinks 0.495       Low
cufflinks 0.996        
cufflinks 2.492        
cufflinks 1.181        
cufflinks 4.713       High
cufflinks 1.788        
cufflinks 0.155       Low
cufflinks 1.804        
cufflinks 1.602        
cufflinks 1.602        
cufflinks 1.774        
cufflinks 2.565        
cufflinks 1.36        
cufflinks 0.708        
cufflinks 1.152        
cufflinks 1.13        
cufflinks 2.563        

0 Strain