Gene : Bradi4g05580 B. distachyon v3.1
Defline:  (1 of 2) PTHR23244//PTHR23244:SF315 - KELCH REPEAT DOMAIN Genomic Order:  724
Name:  ? Bradi4g05580 Secondary Identifier:  ? PAC:32783550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g05580 0.5kb upstream 0.5kb upstream 5222 true Bd4: 4682595-4687816 Brachypodium distachyon
Bradi4g05580 0.5kb upstream 0.5kb upstream 500 false Bd4: 4687317-4687816 Brachypodium distachyon
Bradi4g05580 0.5kb downstream 0.5kb downstream 5222 true Bd4: 4682095-4687316 Brachypodium distachyon
Bradi4g05580 0.5kb downstream 0.5kb downstream 500 false Bd4: 4682095-4682594 Brachypodium distachyon
Bradi4g05580 1.0kb upstream 1.0kb upstream 5722 true Bd4: 4682595-4688316 Brachypodium distachyon
Bradi4g05580 1.0kb upstream 1.0kb upstream 1000 false Bd4: 4687317-4688316 Brachypodium distachyon
Bradi4g05580 1.0kb downstream 1.0kb downstream 5722 true Bd4: 4681595-4687316 Brachypodium distachyon
Bradi4g05580 1.0kb downstream 1.0kb downstream 1000 false Bd4: 4681595-4682594 Brachypodium distachyon
Bradi4g05580 2.0kb upstream 2.0kb upstream 6722 true Bd4: 4682595-4689316 Brachypodium distachyon
Bradi4g05580 2.0kb upstream 2.0kb upstream 2000 false Bd4: 4687317-4689316 Brachypodium distachyon
Bradi4g05580 2.0kb downstream 2.0kb downstream 6722 true Bd4: 4680595-4687316 Brachypodium distachyon
Bradi4g05580 2.0kb downstream 2.0kb downstream 2000 false Bd4: 4680595-4682594 Brachypodium distachyon
Bradi4g05580 5.0kb upstream 5.0kb upstream 9722 true Bd4: 4682595-4692316 Brachypodium distachyon
Bradi4g05580 5.0kb upstream 5.0kb upstream 5000 false Bd4: 4687317-4692316 Brachypodium distachyon
Bradi4g05580 5.0kb downstream 5.0kb downstream 9722 true Bd4: 4677595-4687316 Brachypodium distachyon
Bradi4g05580 5.0kb downstream 5.0kb downstream 5000 false Bd4: 4677595-4682594 Brachypodium distachyon
Bradi4g05580 10.0kb upstream 10.0kb upstream 14722 true Bd4: 4682595-4697316 Brachypodium distachyon
Bradi4g05580 10.0kb upstream 10.0kb upstream 10000 false Bd4: 4687317-4697316 Brachypodium distachyon
Bradi4g05580 10.0kb downstream 10.0kb downstream 14722 true Bd4: 4672595-4687316 Brachypodium distachyon
Bradi4g05580 10.0kb downstream 10.0kb downstream 10000 false Bd4: 4672595-4682594 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121993646 5273 Angiosperm View MSA
124580641 5269 Grass View MSA
121351025 5274 Embryophyte View MSA
123428379 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.812        
cufflinks 6.391        
cufflinks 6.943        
cufflinks 6.373        
cufflinks 4.428        
cufflinks 5.99        
cufflinks 5.522        
cufflinks 5.777        
cufflinks 6.042        
cufflinks 4.1        
cufflinks 3.219       Low
cufflinks 5.901        
cufflinks 2.818       Low
cufflinks 2.696       Low
cufflinks 5.834        
cufflinks 6.753        
cufflinks 5.296        
cufflinks 12.219     High High
cufflinks 5.675        
cufflinks 3.763        
cufflinks 7.248        
cufflinks 6.019        
cufflinks 5.336        
cufflinks 6.275        
cufflinks 5.178        
cufflinks 6.535        
cufflinks 4.372        
cufflinks 6.133        
cufflinks 6.073        
cufflinks 8.334       High

0 Strain