Gene : Bradi4g05817 B. distachyon v3.1
Defline:  (1 of 1) PTHR15117 - ATAXIN 7 RELATED Genomic Order:  753
Name:  ? Bradi4g05817 Secondary Identifier:  ? PAC:32789060
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g05817 0.5kb upstream 0.5kb upstream 8048 true Bd4: 4838266-4846313 Brachypodium distachyon
Bradi4g05817 0.5kb upstream 0.5kb upstream 500 false Bd4: 4845814-4846313 Brachypodium distachyon
Bradi4g05817 0.5kb downstream 0.5kb downstream 8048 true Bd4: 4837766-4845813 Brachypodium distachyon
Bradi4g05817 0.5kb downstream 0.5kb downstream 500 false Bd4: 4837766-4838265 Brachypodium distachyon
Bradi4g05817 1.0kb upstream 1.0kb upstream 8548 true Bd4: 4838266-4846813 Brachypodium distachyon
Bradi4g05817 1.0kb upstream 1.0kb upstream 1000 false Bd4: 4845814-4846813 Brachypodium distachyon
Bradi4g05817 1.0kb downstream 1.0kb downstream 8548 true Bd4: 4837266-4845813 Brachypodium distachyon
Bradi4g05817 1.0kb downstream 1.0kb downstream 1000 false Bd4: 4837266-4838265 Brachypodium distachyon
Bradi4g05817 2.0kb upstream 2.0kb upstream 9548 true Bd4: 4838266-4847813 Brachypodium distachyon
Bradi4g05817 2.0kb upstream 2.0kb upstream 2000 false Bd4: 4845814-4847813 Brachypodium distachyon
Bradi4g05817 2.0kb downstream 2.0kb downstream 9548 true Bd4: 4836266-4845813 Brachypodium distachyon
Bradi4g05817 2.0kb downstream 2.0kb downstream 2000 false Bd4: 4836266-4838265 Brachypodium distachyon
Bradi4g05817 5.0kb upstream 5.0kb upstream 12548 true Bd4: 4838266-4850813 Brachypodium distachyon
Bradi4g05817 5.0kb upstream 5.0kb upstream 5000 false Bd4: 4845814-4850813 Brachypodium distachyon
Bradi4g05817 5.0kb downstream 5.0kb downstream 12548 true Bd4: 4833266-4845813 Brachypodium distachyon
Bradi4g05817 5.0kb downstream 5.0kb downstream 5000 false Bd4: 4833266-4838265 Brachypodium distachyon
Bradi4g05817 10.0kb upstream 10.0kb upstream 17548 true Bd4: 4838266-4855813 Brachypodium distachyon
Bradi4g05817 10.0kb upstream 10.0kb upstream 10000 false Bd4: 4845814-4855813 Brachypodium distachyon
Bradi4g05817 10.0kb downstream 10.0kb downstream 17548 true Bd4: 4828266-4845813 Brachypodium distachyon
Bradi4g05817 10.0kb downstream 10.0kb downstream 10000 false Bd4: 4828266-4838265 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577991 5269 Grass View MSA
122048179 5273 Angiosperm View MSA
121348263 5274 Embryophyte View MSA
123380797 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.201        
cufflinks 1.802        
cufflinks 2.044        
cufflinks 1.75        
cufflinks 0.683       Low
cufflinks 1.475        
cufflinks 1.614        
cufflinks 1.468        
cufflinks 1.626        
cufflinks 1.611        
cufflinks 1.832        
cufflinks 1.287        
cufflinks 1.731        
cufflinks 1.602        
cufflinks 1.165        
cufflinks 1.493        
cufflinks 1.2        
cufflinks 1.171        
cufflinks 1.691        
cufflinks 0.479       Low
cufflinks 1.406        
cufflinks 2.117       High
cufflinks 1.548        
cufflinks 1.573        
cufflinks 1.497        
cufflinks 2.104       High
cufflinks 2.289       High
cufflinks 2.115       High
cufflinks 2.141       High
cufflinks 1.246        

0 Strain