Gene : Bradi4g06390 B. distachyon v3.1
Defline:  (1 of 2) PTHR21736:SF20 - PROTEIN OBERON 1-RELATED Genomic Order:  831
Name:  ? Bradi4g06390 Secondary Identifier:  ? PAC:32786879
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g06390 0.5kb upstream 0.5kb upstream 4879 true Bd4: 5360903-5365781 Brachypodium distachyon
Bradi4g06390 0.5kb upstream 0.5kb upstream 500 false Bd4: 5360903-5361402 Brachypodium distachyon
Bradi4g06390 0.5kb downstream 0.5kb downstream 4879 true Bd4: 5361403-5366281 Brachypodium distachyon
Bradi4g06390 0.5kb downstream 0.5kb downstream 500 false Bd4: 5365782-5366281 Brachypodium distachyon
Bradi4g06390 1.0kb upstream 1.0kb upstream 5379 true Bd4: 5360403-5365781 Brachypodium distachyon
Bradi4g06390 1.0kb upstream 1.0kb upstream 1000 false Bd4: 5360403-5361402 Brachypodium distachyon
Bradi4g06390 1.0kb downstream 1.0kb downstream 5379 true Bd4: 5361403-5366781 Brachypodium distachyon
Bradi4g06390 1.0kb downstream 1.0kb downstream 1000 false Bd4: 5365782-5366781 Brachypodium distachyon
Bradi4g06390 2.0kb upstream 2.0kb upstream 6379 true Bd4: 5359403-5365781 Brachypodium distachyon
Bradi4g06390 2.0kb upstream 2.0kb upstream 2000 false Bd4: 5359403-5361402 Brachypodium distachyon
Bradi4g06390 2.0kb downstream 2.0kb downstream 6379 true Bd4: 5361403-5367781 Brachypodium distachyon
Bradi4g06390 2.0kb downstream 2.0kb downstream 2000 false Bd4: 5365782-5367781 Brachypodium distachyon
Bradi4g06390 5.0kb upstream 5.0kb upstream 9379 true Bd4: 5356403-5365781 Brachypodium distachyon
Bradi4g06390 5.0kb upstream 5.0kb upstream 5000 false Bd4: 5356403-5361402 Brachypodium distachyon
Bradi4g06390 5.0kb downstream 5.0kb downstream 9379 true Bd4: 5361403-5370781 Brachypodium distachyon
Bradi4g06390 5.0kb downstream 5.0kb downstream 5000 false Bd4: 5365782-5370781 Brachypodium distachyon
Bradi4g06390 10.0kb upstream 10.0kb upstream 14379 true Bd4: 5351403-5365781 Brachypodium distachyon
Bradi4g06390 10.0kb upstream 10.0kb upstream 10000 false Bd4: 5351403-5361402 Brachypodium distachyon
Bradi4g06390 10.0kb downstream 10.0kb downstream 14379 true Bd4: 5361403-5375781 Brachypodium distachyon
Bradi4g06390 10.0kb downstream 10.0kb downstream 10000 false Bd4: 5365782-5375781 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578887 5269 Grass View MSA
122041658 5273 Angiosperm View MSA
121346503 5274 Embryophyte View MSA
123380393 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.659        
cufflinks 4.955        
cufflinks 6.699        
cufflinks 4.556        
cufflinks 7.019        
cufflinks 5.251        
cufflinks 4.9        
cufflinks 5.285        
cufflinks 5.233        
cufflinks 5.326        
cufflinks 6.702        
cufflinks 6.146        
cufflinks 5.112        
cufflinks 5.016        
cufflinks 6.695        
cufflinks 5.394        
cufflinks 4.31       Low
cufflinks 8.447       High
cufflinks 5.206        
cufflinks 7.475       High
cufflinks 6.104        
cufflinks 6.738        
cufflinks 5.009        
cufflinks 4.361       Low
cufflinks 4.108       Low
cufflinks 6.254        
cufflinks 6.869        
cufflinks 6.758        
cufflinks 6.109        
cufflinks 8.074       High

0 Strain