Gene : Bradi4g06350 B. distachyon v3.1
Defline:  (1 of 7) PF00536 - SAM domain (Sterile alpha motif) (SAM_1) Genomic Order:  824
Name:  ? Bradi4g06350 Secondary Identifier:  ? PAC:32786953
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g06350 0.5kb upstream 0.5kb upstream 4279 true Bd4: 5317676-5321954 Brachypodium distachyon
Bradi4g06350 0.5kb upstream 0.5kb upstream 500 false Bd4: 5317676-5318175 Brachypodium distachyon
Bradi4g06350 0.5kb downstream 0.5kb downstream 4279 true Bd4: 5318176-5322454 Brachypodium distachyon
Bradi4g06350 0.5kb downstream 0.5kb downstream 500 false Bd4: 5321955-5322454 Brachypodium distachyon
Bradi4g06350 1.0kb upstream 1.0kb upstream 4779 true Bd4: 5317176-5321954 Brachypodium distachyon
Bradi4g06350 1.0kb upstream 1.0kb upstream 1000 false Bd4: 5317176-5318175 Brachypodium distachyon
Bradi4g06350 1.0kb downstream 1.0kb downstream 4779 true Bd4: 5318176-5322954 Brachypodium distachyon
Bradi4g06350 1.0kb downstream 1.0kb downstream 1000 false Bd4: 5321955-5322954 Brachypodium distachyon
Bradi4g06350 2.0kb upstream 2.0kb upstream 5779 true Bd4: 5316176-5321954 Brachypodium distachyon
Bradi4g06350 2.0kb upstream 2.0kb upstream 2000 false Bd4: 5316176-5318175 Brachypodium distachyon
Bradi4g06350 2.0kb downstream 2.0kb downstream 5779 true Bd4: 5318176-5323954 Brachypodium distachyon
Bradi4g06350 2.0kb downstream 2.0kb downstream 2000 false Bd4: 5321955-5323954 Brachypodium distachyon
Bradi4g06350 5.0kb upstream 5.0kb upstream 8779 true Bd4: 5313176-5321954 Brachypodium distachyon
Bradi4g06350 5.0kb upstream 5.0kb upstream 5000 false Bd4: 5313176-5318175 Brachypodium distachyon
Bradi4g06350 5.0kb downstream 5.0kb downstream 8779 true Bd4: 5318176-5326954 Brachypodium distachyon
Bradi4g06350 5.0kb downstream 5.0kb downstream 5000 false Bd4: 5321955-5326954 Brachypodium distachyon
Bradi4g06350 10.0kb upstream 10.0kb upstream 13779 true Bd4: 5308176-5321954 Brachypodium distachyon
Bradi4g06350 10.0kb upstream 10.0kb upstream 10000 false Bd4: 5308176-5318175 Brachypodium distachyon
Bradi4g06350 10.0kb downstream 10.0kb downstream 13779 true Bd4: 5318176-5331954 Brachypodium distachyon
Bradi4g06350 10.0kb downstream 10.0kb downstream 10000 false Bd4: 5321955-5331954 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587072 5269 Grass View MSA
122050384 5273 Angiosperm View MSA
121345034 5274 Embryophyte View MSA
123380141 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.636        
cufflinks 7.311        
cufflinks 7.027        
cufflinks 7.258        
cufflinks 7.504        
cufflinks 6.034        
cufflinks 7.088        
cufflinks 6.699        
cufflinks 6.454        
cufflinks 4.842        
cufflinks 3.534       Low
cufflinks 5.411        
cufflinks 3.417       Low
cufflinks 3.534       Low
cufflinks 5.903        
cufflinks 6.434        
cufflinks 6.996        
cufflinks 12.34     High High
cufflinks 11.063       High
cufflinks 4.219       Low
cufflinks 15.557     High High
cufflinks 5.648        
cufflinks 6.025        
cufflinks 5.868        
cufflinks 5.967        
cufflinks 6.276        
cufflinks 4.414       Low
cufflinks 7.69        
cufflinks 6.148        
cufflinks 11.994     High High

0 Strain