Gene : Bradi4g23680 B. distachyon v3.1
Defline:  (1 of 1) PTHR23315:SF135 - ARMADILLO/BETA-CATENIN-LIKE REPEAT AND C2 CALCIUM/LIPID-BINDING DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3001
Name:  ? Bradi4g23680 Secondary Identifier:  ? PAC:32790008
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g23680 0.5kb upstream 0.5kb upstream 11075 true Bd4: 28429129-28440203 Brachypodium distachyon
Bradi4g23680 0.5kb upstream 0.5kb upstream 500 false Bd4: 28439704-28440203 Brachypodium distachyon
Bradi4g23680 0.5kb downstream 0.5kb downstream 11075 true Bd4: 28428629-28439703 Brachypodium distachyon
Bradi4g23680 0.5kb downstream 0.5kb downstream 500 false Bd4: 28428629-28429128 Brachypodium distachyon
Bradi4g23680 1.0kb upstream 1.0kb upstream 11575 true Bd4: 28429129-28440703 Brachypodium distachyon
Bradi4g23680 1.0kb upstream 1.0kb upstream 1000 false Bd4: 28439704-28440703 Brachypodium distachyon
Bradi4g23680 1.0kb downstream 1.0kb downstream 11575 true Bd4: 28428129-28439703 Brachypodium distachyon
Bradi4g23680 1.0kb downstream 1.0kb downstream 1000 false Bd4: 28428129-28429128 Brachypodium distachyon
Bradi4g23680 2.0kb upstream 2.0kb upstream 12575 true Bd4: 28429129-28441703 Brachypodium distachyon
Bradi4g23680 2.0kb upstream 2.0kb upstream 2000 false Bd4: 28439704-28441703 Brachypodium distachyon
Bradi4g23680 2.0kb downstream 2.0kb downstream 12575 true Bd4: 28427129-28439703 Brachypodium distachyon
Bradi4g23680 2.0kb downstream 2.0kb downstream 2000 false Bd4: 28427129-28429128 Brachypodium distachyon
Bradi4g23680 5.0kb upstream 5.0kb upstream 15575 true Bd4: 28429129-28444703 Brachypodium distachyon
Bradi4g23680 5.0kb upstream 5.0kb upstream 5000 false Bd4: 28439704-28444703 Brachypodium distachyon
Bradi4g23680 5.0kb downstream 5.0kb downstream 15575 true Bd4: 28424129-28439703 Brachypodium distachyon
Bradi4g23680 5.0kb downstream 5.0kb downstream 5000 false Bd4: 28424129-28429128 Brachypodium distachyon
Bradi4g23680 10.0kb upstream 10.0kb upstream 20575 true Bd4: 28429129-28449703 Brachypodium distachyon
Bradi4g23680 10.0kb upstream 10.0kb upstream 10000 false Bd4: 28439704-28449703 Brachypodium distachyon
Bradi4g23680 10.0kb downstream 10.0kb downstream 20575 true Bd4: 28419129-28439703 Brachypodium distachyon
Bradi4g23680 10.0kb downstream 10.0kb downstream 10000 false Bd4: 28419129-28429128 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122048106 5273 Angiosperm View MSA
124583203 5269 Grass View MSA
121347002 5274 Embryophyte View MSA
123380478 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.841        
cufflinks 5.201        
cufflinks 5.93        
cufflinks 3.82        
cufflinks 0.961       Low
cufflinks 5.94        
cufflinks 4.293        
cufflinks 6.941        
cufflinks 6.957        
cufflinks 3.049        
cufflinks 6.299        
cufflinks 7.578        
cufflinks 6.449        
cufflinks 3.817        
cufflinks 4.145        
cufflinks 5.417        
cufflinks 2.169        
cufflinks 5.636        
cufflinks 1.65        
cufflinks 0.371       Low
cufflinks 3.077        
cufflinks 8.865       High
cufflinks 6.753        
cufflinks 6.046        
cufflinks 3.559        
cufflinks 4.699        
cufflinks 3.866        
cufflinks 4.481        
cufflinks 5.74        
cufflinks 6.529        

0 Strain