Gene : Bradi4g23620 B. distachyon v3.1
Defline:  (1 of 2) PTHR11699//PTHR11699:SF175 - ALDEHYDE DEHYDROGENASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  2992
Name:  ? Bradi4g23620 Secondary Identifier:  ? PAC:32783169
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-2724 Brachypodium distachyon pathologic  
Bdistachyon PWY66-21 Brachypodium distachyon pathologic  
Bdistachyon PWY66-389 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g23620 0.5kb upstream 0.5kb upstream 5605 true Bd4: 28323524-28329128 Brachypodium distachyon
Bradi4g23620 0.5kb upstream 0.5kb upstream 500 false Bd4: 28328629-28329128 Brachypodium distachyon
Bradi4g23620 0.5kb downstream 0.5kb downstream 5605 true Bd4: 28323024-28328628 Brachypodium distachyon
Bradi4g23620 0.5kb downstream 0.5kb downstream 500 false Bd4: 28323024-28323523 Brachypodium distachyon
Bradi4g23620 1.0kb upstream 1.0kb upstream 6105 true Bd4: 28323524-28329628 Brachypodium distachyon
Bradi4g23620 1.0kb upstream 1.0kb upstream 1000 false Bd4: 28328629-28329628 Brachypodium distachyon
Bradi4g23620 1.0kb downstream 1.0kb downstream 6105 true Bd4: 28322524-28328628 Brachypodium distachyon
Bradi4g23620 1.0kb downstream 1.0kb downstream 1000 false Bd4: 28322524-28323523 Brachypodium distachyon
Bradi4g23620 2.0kb upstream 2.0kb upstream 7105 true Bd4: 28323524-28330628 Brachypodium distachyon
Bradi4g23620 2.0kb upstream 2.0kb upstream 2000 false Bd4: 28328629-28330628 Brachypodium distachyon
Bradi4g23620 2.0kb downstream 2.0kb downstream 7105 true Bd4: 28321524-28328628 Brachypodium distachyon
Bradi4g23620 2.0kb downstream 2.0kb downstream 2000 false Bd4: 28321524-28323523 Brachypodium distachyon
Bradi4g23620 5.0kb upstream 5.0kb upstream 10105 true Bd4: 28323524-28333628 Brachypodium distachyon
Bradi4g23620 5.0kb upstream 5.0kb upstream 5000 false Bd4: 28328629-28333628 Brachypodium distachyon
Bradi4g23620 5.0kb downstream 5.0kb downstream 10105 true Bd4: 28318524-28328628 Brachypodium distachyon
Bradi4g23620 5.0kb downstream 5.0kb downstream 5000 false Bd4: 28318524-28323523 Brachypodium distachyon
Bradi4g23620 10.0kb upstream 10.0kb upstream 15105 true Bd4: 28323524-28338628 Brachypodium distachyon
Bradi4g23620 10.0kb upstream 10.0kb upstream 10000 false Bd4: 28328629-28338628 Brachypodium distachyon
Bradi4g23620 10.0kb downstream 10.0kb downstream 15105 true Bd4: 28313524-28328628 Brachypodium distachyon
Bradi4g23620 10.0kb downstream 10.0kb downstream 10000 false Bd4: 28313524-28323523 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579064 5269 Grass View MSA
122047593 5273 Angiosperm View MSA
121349887 5274 Embryophyte View MSA
123425420 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.304     High  
cufflinks 21.227     High  
cufflinks 19.128     High  
cufflinks 15.575     High  
cufflinks 107.182     High High
cufflinks 22.385     High  
cufflinks 25.763     High  
cufflinks 12.917     High Low
cufflinks 16.777     High  
cufflinks 13.936     High  
cufflinks 25.136     High  
cufflinks 20.562     High  
cufflinks 18.415     High  
cufflinks 16.105     High  
cufflinks 12.631     High Low
cufflinks 19.353     High  
cufflinks 15.864     High  
cufflinks 45.218     High High
cufflinks 29.129     High  
cufflinks 68.0     High High
cufflinks 23.397     High  
cufflinks 17.16     High  
cufflinks 13.244     High  
cufflinks 14.788     High  
cufflinks 17.972     High  
cufflinks 17.663     High  
cufflinks 23.709     High  
cufflinks 16.982     High  
cufflinks 15.91     High  
cufflinks 27.864     High  

0 Strain