Gene : Bradi4g23625 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  2994
Name:  ? Bradi4g23625 Secondary Identifier:  ? PAC:32788510
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g23625 0.5kb upstream 0.5kb upstream 4607 true Bd4: 28335164-28339770 Brachypodium distachyon
Bradi4g23625 0.5kb upstream 0.5kb upstream 500 false Bd4: 28339271-28339770 Brachypodium distachyon
Bradi4g23625 0.5kb downstream 0.5kb downstream 4607 true Bd4: 28334664-28339270 Brachypodium distachyon
Bradi4g23625 0.5kb downstream 0.5kb downstream 500 false Bd4: 28334664-28335163 Brachypodium distachyon
Bradi4g23625 1.0kb upstream 1.0kb upstream 5107 true Bd4: 28335164-28340270 Brachypodium distachyon
Bradi4g23625 1.0kb upstream 1.0kb upstream 1000 false Bd4: 28339271-28340270 Brachypodium distachyon
Bradi4g23625 1.0kb downstream 1.0kb downstream 5107 true Bd4: 28334164-28339270 Brachypodium distachyon
Bradi4g23625 1.0kb downstream 1.0kb downstream 1000 false Bd4: 28334164-28335163 Brachypodium distachyon
Bradi4g23625 2.0kb upstream 2.0kb upstream 6107 true Bd4: 28335164-28341270 Brachypodium distachyon
Bradi4g23625 2.0kb upstream 2.0kb upstream 2000 false Bd4: 28339271-28341270 Brachypodium distachyon
Bradi4g23625 2.0kb downstream 2.0kb downstream 6107 true Bd4: 28333164-28339270 Brachypodium distachyon
Bradi4g23625 2.0kb downstream 2.0kb downstream 2000 false Bd4: 28333164-28335163 Brachypodium distachyon
Bradi4g23625 5.0kb upstream 5.0kb upstream 9107 true Bd4: 28335164-28344270 Brachypodium distachyon
Bradi4g23625 5.0kb upstream 5.0kb upstream 5000 false Bd4: 28339271-28344270 Brachypodium distachyon
Bradi4g23625 5.0kb downstream 5.0kb downstream 9107 true Bd4: 28330164-28339270 Brachypodium distachyon
Bradi4g23625 5.0kb downstream 5.0kb downstream 5000 false Bd4: 28330164-28335163 Brachypodium distachyon
Bradi4g23625 10.0kb upstream 10.0kb upstream 14107 true Bd4: 28335164-28349270 Brachypodium distachyon
Bradi4g23625 10.0kb upstream 10.0kb upstream 10000 false Bd4: 28339271-28349270 Brachypodium distachyon
Bradi4g23625 10.0kb downstream 10.0kb downstream 14107 true Bd4: 28325164-28339270 Brachypodium distachyon
Bradi4g23625 10.0kb downstream 10.0kb downstream 10000 false Bd4: 28325164-28335163 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121992240 5273 Angiosperm View MSA
124567967 5269 Grass View MSA
121262604 5274 Embryophyte View MSA
123301245 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.012     Low  
cufflinks 0.015     Low  
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.012     Low  
cufflinks 0.016     Low  
cufflinks 0.021     Low  
cufflinks 0.024     Low  
cufflinks 0.008     Low  
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.015     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.109     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.029     Low  
cufflinks 0.028     Low  
cufflinks 0.017     Low  
cufflinks 0.005     Low Low
cufflinks 0.012     Low  
cufflinks 0.048     Low High
cufflinks 0.011     Low  
cufflinks 0.009     Low  
cufflinks 0.042     Low High

0 Strain