Gene : Bradi4g07607 B. distachyon v3.1
Defline:  (1 of 56) PF03101//PF10551 - FAR1 DNA-binding domain (FAR1) // MULE transposase domain (MULE) Genomic Order:  997
Name:  ? Bradi4g07607 Secondary Identifier:  ? PAC:32784100
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g07607 0.5kb upstream 0.5kb upstream 3904 true Bd4: 6536773-6540676 Brachypodium distachyon
Bradi4g07607 0.5kb upstream 0.5kb upstream 500 false Bd4: 6540177-6540676 Brachypodium distachyon
Bradi4g07607 0.5kb downstream 0.5kb downstream 3904 true Bd4: 6536273-6540176 Brachypodium distachyon
Bradi4g07607 0.5kb downstream 0.5kb downstream 500 false Bd4: 6536273-6536772 Brachypodium distachyon
Bradi4g07607 1.0kb upstream 1.0kb upstream 4404 true Bd4: 6536773-6541176 Brachypodium distachyon
Bradi4g07607 1.0kb upstream 1.0kb upstream 1000 false Bd4: 6540177-6541176 Brachypodium distachyon
Bradi4g07607 1.0kb downstream 1.0kb downstream 4404 true Bd4: 6535773-6540176 Brachypodium distachyon
Bradi4g07607 1.0kb downstream 1.0kb downstream 1000 false Bd4: 6535773-6536772 Brachypodium distachyon
Bradi4g07607 2.0kb upstream 2.0kb upstream 5404 true Bd4: 6536773-6542176 Brachypodium distachyon
Bradi4g07607 2.0kb upstream 2.0kb upstream 2000 false Bd4: 6540177-6542176 Brachypodium distachyon
Bradi4g07607 2.0kb downstream 2.0kb downstream 5404 true Bd4: 6534773-6540176 Brachypodium distachyon
Bradi4g07607 2.0kb downstream 2.0kb downstream 2000 false Bd4: 6534773-6536772 Brachypodium distachyon
Bradi4g07607 5.0kb upstream 5.0kb upstream 8404 true Bd4: 6536773-6545176 Brachypodium distachyon
Bradi4g07607 5.0kb upstream 5.0kb upstream 5000 false Bd4: 6540177-6545176 Brachypodium distachyon
Bradi4g07607 5.0kb downstream 5.0kb downstream 8404 true Bd4: 6531773-6540176 Brachypodium distachyon
Bradi4g07607 5.0kb downstream 5.0kb downstream 5000 false Bd4: 6531773-6536772 Brachypodium distachyon
Bradi4g07607 10.0kb upstream 10.0kb upstream 13404 true Bd4: 6536773-6550176 Brachypodium distachyon
Bradi4g07607 10.0kb upstream 10.0kb upstream 10000 false Bd4: 6540177-6550176 Brachypodium distachyon
Bradi4g07607 10.0kb downstream 10.0kb downstream 13404 true Bd4: 6526773-6540176 Brachypodium distachyon
Bradi4g07607 10.0kb downstream 10.0kb downstream 10000 false Bd4: 6526773-6536772 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031606 5273 Angiosperm View MSA
124589040 5269 Grass View MSA
121300621 5274 Embryophyte View MSA
123338368 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.03     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.071     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.007     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.009     Low  
cufflinks 0.004     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain