Gene : Bradi4g07670 B. distachyon v3.1
Defline:  (1 of 1) PTHR24322//PTHR24322:SF449 - FAMILY NOT NAMED // WW DOMAIN-CONTAINING OXIDOREDUCTASE Genomic Order:  1005
Name:  ? Bradi4g07670 Secondary Identifier:  ? PAC:32789889
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g07670 0.5kb upstream 0.5kb upstream 4081 true Bd4: 6576025-6580105 Brachypodium distachyon
Bradi4g07670 0.5kb upstream 0.5kb upstream 500 false Bd4: 6579606-6580105 Brachypodium distachyon
Bradi4g07670 0.5kb downstream 0.5kb downstream 4081 true Bd4: 6575525-6579605 Brachypodium distachyon
Bradi4g07670 0.5kb downstream 0.5kb downstream 500 false Bd4: 6575525-6576024 Brachypodium distachyon
Bradi4g07670 1.0kb upstream 1.0kb upstream 4581 true Bd4: 6576025-6580605 Brachypodium distachyon
Bradi4g07670 1.0kb upstream 1.0kb upstream 1000 false Bd4: 6579606-6580605 Brachypodium distachyon
Bradi4g07670 1.0kb downstream 1.0kb downstream 4581 true Bd4: 6575025-6579605 Brachypodium distachyon
Bradi4g07670 1.0kb downstream 1.0kb downstream 1000 false Bd4: 6575025-6576024 Brachypodium distachyon
Bradi4g07670 2.0kb upstream 2.0kb upstream 5581 true Bd4: 6576025-6581605 Brachypodium distachyon
Bradi4g07670 2.0kb upstream 2.0kb upstream 2000 false Bd4: 6579606-6581605 Brachypodium distachyon
Bradi4g07670 2.0kb downstream 2.0kb downstream 5581 true Bd4: 6574025-6579605 Brachypodium distachyon
Bradi4g07670 2.0kb downstream 2.0kb downstream 2000 false Bd4: 6574025-6576024 Brachypodium distachyon
Bradi4g07670 5.0kb upstream 5.0kb upstream 8581 true Bd4: 6576025-6584605 Brachypodium distachyon
Bradi4g07670 5.0kb upstream 5.0kb upstream 5000 false Bd4: 6579606-6584605 Brachypodium distachyon
Bradi4g07670 5.0kb downstream 5.0kb downstream 8581 true Bd4: 6571025-6579605 Brachypodium distachyon
Bradi4g07670 5.0kb downstream 5.0kb downstream 5000 false Bd4: 6571025-6576024 Brachypodium distachyon
Bradi4g07670 10.0kb upstream 10.0kb upstream 13581 true Bd4: 6576025-6589605 Brachypodium distachyon
Bradi4g07670 10.0kb upstream 10.0kb upstream 10000 false Bd4: 6579606-6589605 Brachypodium distachyon
Bradi4g07670 10.0kb downstream 10.0kb downstream 13581 true Bd4: 6566025-6579605 Brachypodium distachyon
Bradi4g07670 10.0kb downstream 10.0kb downstream 10000 false Bd4: 6566025-6576024 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569046 5269 Grass View MSA
122047684 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121345666 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.095        
cufflinks 0.241        
cufflinks 0.174        
cufflinks 0.193        
cufflinks 0.222        
cufflinks 0.121        
cufflinks 0.15        
cufflinks 0.099        
cufflinks 0.118        
cufflinks 0.145        
cufflinks 0.041     Low Low
cufflinks 0.053     Low  
cufflinks 0.021     Low Low
cufflinks 0.033     Low Low
cufflinks 0.037     Low Low
cufflinks 0.092        
cufflinks 0.038     Low Low
cufflinks 0.167        
cufflinks 0.511       High
cufflinks 0.471       High
cufflinks 0.327       High
cufflinks 0.1     Low  
cufflinks 0.117        
cufflinks 0.066     Low  
cufflinks 0.099     Low  
cufflinks 0.175        
cufflinks 0.018     Low Low
cufflinks 0.159        
cufflinks 0.196        
cufflinks 0.281        

0 Strain