Gene : Bradi4g07780 B. distachyon v3.1
Defline:  (1 of 1) PTHR14021:SF15 - IRON-SULFUR CLUSTER CO-CHAPERONE PROTEIN HSCB, MITOCHONDRIAL Genomic Order:  1018
Name:  ? Bradi4g07780 Secondary Identifier:  ? PAC:32791512
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g07780 0.5kb upstream 0.5kb upstream 3531 true Bd4: 6697766-6701296 Brachypodium distachyon
Bradi4g07780 0.5kb upstream 0.5kb upstream 500 false Bd4: 6697766-6698265 Brachypodium distachyon
Bradi4g07780 0.5kb downstream 0.5kb downstream 3531 true Bd4: 6698266-6701796 Brachypodium distachyon
Bradi4g07780 0.5kb downstream 0.5kb downstream 500 false Bd4: 6701297-6701796 Brachypodium distachyon
Bradi4g07780 1.0kb upstream 1.0kb upstream 4031 true Bd4: 6697266-6701296 Brachypodium distachyon
Bradi4g07780 1.0kb upstream 1.0kb upstream 1000 false Bd4: 6697266-6698265 Brachypodium distachyon
Bradi4g07780 1.0kb downstream 1.0kb downstream 4031 true Bd4: 6698266-6702296 Brachypodium distachyon
Bradi4g07780 1.0kb downstream 1.0kb downstream 1000 false Bd4: 6701297-6702296 Brachypodium distachyon
Bradi4g07780 2.0kb upstream 2.0kb upstream 5031 true Bd4: 6696266-6701296 Brachypodium distachyon
Bradi4g07780 2.0kb upstream 2.0kb upstream 2000 false Bd4: 6696266-6698265 Brachypodium distachyon
Bradi4g07780 2.0kb downstream 2.0kb downstream 5031 true Bd4: 6698266-6703296 Brachypodium distachyon
Bradi4g07780 2.0kb downstream 2.0kb downstream 2000 false Bd4: 6701297-6703296 Brachypodium distachyon
Bradi4g07780 5.0kb upstream 5.0kb upstream 8031 true Bd4: 6693266-6701296 Brachypodium distachyon
Bradi4g07780 5.0kb upstream 5.0kb upstream 5000 false Bd4: 6693266-6698265 Brachypodium distachyon
Bradi4g07780 5.0kb downstream 5.0kb downstream 8031 true Bd4: 6698266-6706296 Brachypodium distachyon
Bradi4g07780 5.0kb downstream 5.0kb downstream 5000 false Bd4: 6701297-6706296 Brachypodium distachyon
Bradi4g07780 10.0kb upstream 10.0kb upstream 13031 true Bd4: 6688266-6701296 Brachypodium distachyon
Bradi4g07780 10.0kb upstream 10.0kb upstream 10000 false Bd4: 6688266-6698265 Brachypodium distachyon
Bradi4g07780 10.0kb downstream 10.0kb downstream 13031 true Bd4: 6698266-6711296 Brachypodium distachyon
Bradi4g07780 10.0kb downstream 10.0kb downstream 10000 false Bd4: 6701297-6711296 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569010 5269 Grass View MSA
122043255 5273 Angiosperm View MSA
121346465 5274 Embryophyte View MSA
123425339 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.208       Low
cufflinks 2.642        
cufflinks 2.17       Low
cufflinks 2.215       Low
cufflinks 4.582       High
cufflinks 2.566        
cufflinks 2.632        
cufflinks 3.813        
cufflinks 3.161        
cufflinks 2.324        
cufflinks 3.047        
cufflinks 2.785        
cufflinks 2.377        
cufflinks 2.818        
cufflinks 4.609       High
cufflinks 2.504        
cufflinks 3.795        
cufflinks 4.035        
cufflinks 5.699       High
cufflinks 7.046       High
cufflinks 4.296        
cufflinks 2.974        
cufflinks 3.608        
cufflinks 3.013        
cufflinks 2.83        
cufflinks 2.185       Low
cufflinks 3.523        
cufflinks 2.504        
cufflinks 2.607        
cufflinks 3.238        

0 Strain