Gene : Bradi4g25140 B. distachyon v3.1
Defline:  (1 of 3) 1.1.1.22 - UDP-glucose 6-dehydrogenase Genomic Order:  3217
Name:  ? Bradi4g25140 Secondary Identifier:  ? PAC:32784643
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-4821 Brachypodium distachyon pathologic  
Bdistachyon PWY-7346 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g25140 0.5kb upstream 0.5kb upstream 3617 true Bd4: 30236991-30240607 Brachypodium distachyon
Bradi4g25140 0.5kb upstream 0.5kb upstream 500 false Bd4: 30236991-30237490 Brachypodium distachyon
Bradi4g25140 0.5kb downstream 0.5kb downstream 3617 true Bd4: 30237491-30241107 Brachypodium distachyon
Bradi4g25140 0.5kb downstream 0.5kb downstream 500 false Bd4: 30240608-30241107 Brachypodium distachyon
Bradi4g25140 1.0kb upstream 1.0kb upstream 4117 true Bd4: 30236491-30240607 Brachypodium distachyon
Bradi4g25140 1.0kb upstream 1.0kb upstream 1000 false Bd4: 30236491-30237490 Brachypodium distachyon
Bradi4g25140 1.0kb downstream 1.0kb downstream 4117 true Bd4: 30237491-30241607 Brachypodium distachyon
Bradi4g25140 1.0kb downstream 1.0kb downstream 1000 false Bd4: 30240608-30241607 Brachypodium distachyon
Bradi4g25140 2.0kb upstream 2.0kb upstream 5117 true Bd4: 30235491-30240607 Brachypodium distachyon
Bradi4g25140 2.0kb upstream 2.0kb upstream 2000 false Bd4: 30235491-30237490 Brachypodium distachyon
Bradi4g25140 2.0kb downstream 2.0kb downstream 5117 true Bd4: 30237491-30242607 Brachypodium distachyon
Bradi4g25140 2.0kb downstream 2.0kb downstream 2000 false Bd4: 30240608-30242607 Brachypodium distachyon
Bradi4g25140 5.0kb upstream 5.0kb upstream 8117 true Bd4: 30232491-30240607 Brachypodium distachyon
Bradi4g25140 5.0kb upstream 5.0kb upstream 5000 false Bd4: 30232491-30237490 Brachypodium distachyon
Bradi4g25140 5.0kb downstream 5.0kb downstream 8117 true Bd4: 30237491-30245607 Brachypodium distachyon
Bradi4g25140 5.0kb downstream 5.0kb downstream 5000 false Bd4: 30240608-30245607 Brachypodium distachyon
Bradi4g25140 10.0kb upstream 10.0kb upstream 13117 true Bd4: 30227491-30240607 Brachypodium distachyon
Bradi4g25140 10.0kb upstream 10.0kb upstream 10000 false Bd4: 30227491-30237490 Brachypodium distachyon
Bradi4g25140 10.0kb downstream 10.0kb downstream 13117 true Bd4: 30237491-30250607 Brachypodium distachyon
Bradi4g25140 10.0kb downstream 10.0kb downstream 10000 false Bd4: 30240608-30250607 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585857 5269 Grass View MSA
122047797 5273 Angiosperm View MSA
121346775 5274 Embryophyte View MSA
123428129 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 62.553     High  
cufflinks 42.845     High  
cufflinks 44.479     High  
cufflinks 44.019     High  
cufflinks 139.87     High High
cufflinks 45.98     High  
cufflinks 38.725     High  
cufflinks 66.358     High  
cufflinks 45.749     High  
cufflinks 26.469     High Low
cufflinks 105.881     High High
cufflinks 81.915     High  
cufflinks 15.617     High Low
cufflinks 23.115     High Low
cufflinks 58.851     High  
cufflinks 49.635     High  
cufflinks 50.172     High  
cufflinks 98.288     High High
cufflinks 113.733     High High
cufflinks 63.888     High  
cufflinks 94.749     High High
cufflinks 40.352     High  
cufflinks 48.048     High  
cufflinks 56.306     High  
cufflinks 40.93     High  
cufflinks 36.668     High  
cufflinks 13.256     High Low
cufflinks 31.052     High  
cufflinks 35.586     High  
cufflinks 125.528     High High

0 Strain