Gene : Bradi4g03610 B. distachyon v3.1
Defline:  (1 of 1) PTHR11785//PTHR11785:SF366 - AMINO ACID TRANSPORTER // SUBFAMILY NOT NAMED Genomic Order:  452
Name:  ? Bradi4g03610 Secondary Identifier:  ? PAC:32788900
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g03610 0.5kb upstream 0.5kb upstream 2514 true Bd4: 2877280-2879793 Brachypodium distachyon
Bradi4g03610 0.5kb upstream 0.5kb upstream 500 false Bd4: 2877280-2877779 Brachypodium distachyon
Bradi4g03610 0.5kb downstream 0.5kb downstream 2514 true Bd4: 2877780-2880293 Brachypodium distachyon
Bradi4g03610 0.5kb downstream 0.5kb downstream 500 false Bd4: 2879794-2880293 Brachypodium distachyon
Bradi4g03610 1.0kb upstream 1.0kb upstream 3014 true Bd4: 2876780-2879793 Brachypodium distachyon
Bradi4g03610 1.0kb upstream 1.0kb upstream 1000 false Bd4: 2876780-2877779 Brachypodium distachyon
Bradi4g03610 1.0kb downstream 1.0kb downstream 3014 true Bd4: 2877780-2880793 Brachypodium distachyon
Bradi4g03610 1.0kb downstream 1.0kb downstream 1000 false Bd4: 2879794-2880793 Brachypodium distachyon
Bradi4g03610 2.0kb upstream 2.0kb upstream 4014 true Bd4: 2875780-2879793 Brachypodium distachyon
Bradi4g03610 2.0kb upstream 2.0kb upstream 2000 false Bd4: 2875780-2877779 Brachypodium distachyon
Bradi4g03610 2.0kb downstream 2.0kb downstream 4014 true Bd4: 2877780-2881793 Brachypodium distachyon
Bradi4g03610 2.0kb downstream 2.0kb downstream 2000 false Bd4: 2879794-2881793 Brachypodium distachyon
Bradi4g03610 5.0kb upstream 5.0kb upstream 7014 true Bd4: 2872780-2879793 Brachypodium distachyon
Bradi4g03610 5.0kb upstream 5.0kb upstream 5000 false Bd4: 2872780-2877779 Brachypodium distachyon
Bradi4g03610 5.0kb downstream 5.0kb downstream 7014 true Bd4: 2877780-2884793 Brachypodium distachyon
Bradi4g03610 5.0kb downstream 5.0kb downstream 5000 false Bd4: 2879794-2884793 Brachypodium distachyon
Bradi4g03610 10.0kb upstream 10.0kb upstream 12014 true Bd4: 2867780-2879793 Brachypodium distachyon
Bradi4g03610 10.0kb upstream 10.0kb upstream 10000 false Bd4: 2867780-2877779 Brachypodium distachyon
Bradi4g03610 10.0kb downstream 10.0kb downstream 12014 true Bd4: 2877780-2889793 Brachypodium distachyon
Bradi4g03610 10.0kb downstream 10.0kb downstream 10000 false Bd4: 2879794-2889793 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579195 5269 Grass View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.187     High High
cufflinks 5.549        
cufflinks 3.718        
cufflinks 4.463        
cufflinks 11.044     High High
cufflinks 6.419        
cufflinks 10.707     High High
cufflinks 4.839        
cufflinks 4.893        
cufflinks 2.569       Low
cufflinks 4.891        
cufflinks 2.373       Low
cufflinks 4.393        
cufflinks 3.07        
cufflinks 4.233        
cufflinks 4.474        
cufflinks 9.255        
cufflinks 7.806        
cufflinks 28.028     High High
cufflinks 5.071        
cufflinks 5.958        
cufflinks 1.496       Low
cufflinks 5.995        
cufflinks 6.769        
cufflinks 7.959        
cufflinks 3.165        
cufflinks 6.264        
cufflinks 3.616        
cufflinks 2.576       Low
cufflinks 6.474        

0 Strain