Gene : Bradi4g03820 B. distachyon v3.1
Defline:  (1 of 2) PF06549 - Protein of unknown function (DUF1118) (DUF1118) Genomic Order:  481
Name:  ? Bradi4g03820 Secondary Identifier:  ? PAC:32784869
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g03820 0.5kb upstream 0.5kb upstream 1737 true Bd4: 3065396-3067132 Brachypodium distachyon
Bradi4g03820 0.5kb upstream 0.5kb upstream 500 false Bd4: 3065396-3065895 Brachypodium distachyon
Bradi4g03820 0.5kb downstream 0.5kb downstream 1737 true Bd4: 3065896-3067632 Brachypodium distachyon
Bradi4g03820 0.5kb downstream 0.5kb downstream 500 false Bd4: 3067133-3067632 Brachypodium distachyon
Bradi4g03820 1.0kb upstream 1.0kb upstream 2237 true Bd4: 3064896-3067132 Brachypodium distachyon
Bradi4g03820 1.0kb upstream 1.0kb upstream 1000 false Bd4: 3064896-3065895 Brachypodium distachyon
Bradi4g03820 1.0kb downstream 1.0kb downstream 2237 true Bd4: 3065896-3068132 Brachypodium distachyon
Bradi4g03820 1.0kb downstream 1.0kb downstream 1000 false Bd4: 3067133-3068132 Brachypodium distachyon
Bradi4g03820 2.0kb upstream 2.0kb upstream 3237 true Bd4: 3063896-3067132 Brachypodium distachyon
Bradi4g03820 2.0kb upstream 2.0kb upstream 2000 false Bd4: 3063896-3065895 Brachypodium distachyon
Bradi4g03820 2.0kb downstream 2.0kb downstream 3237 true Bd4: 3065896-3069132 Brachypodium distachyon
Bradi4g03820 2.0kb downstream 2.0kb downstream 2000 false Bd4: 3067133-3069132 Brachypodium distachyon
Bradi4g03820 5.0kb upstream 5.0kb upstream 6237 true Bd4: 3060896-3067132 Brachypodium distachyon
Bradi4g03820 5.0kb upstream 5.0kb upstream 5000 false Bd4: 3060896-3065895 Brachypodium distachyon
Bradi4g03820 5.0kb downstream 5.0kb downstream 6237 true Bd4: 3065896-3072132 Brachypodium distachyon
Bradi4g03820 5.0kb downstream 5.0kb downstream 5000 false Bd4: 3067133-3072132 Brachypodium distachyon
Bradi4g03820 10.0kb upstream 10.0kb upstream 11237 true Bd4: 3055896-3067132 Brachypodium distachyon
Bradi4g03820 10.0kb upstream 10.0kb upstream 10000 false Bd4: 3055896-3065895 Brachypodium distachyon
Bradi4g03820 10.0kb downstream 10.0kb downstream 11237 true Bd4: 3065896-3077132 Brachypodium distachyon
Bradi4g03820 10.0kb downstream 10.0kb downstream 10000 false Bd4: 3067133-3077132 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583626 5269 Grass View MSA
122046942 5273 Angiosperm View MSA
121348217 5274 Embryophyte View MSA
123424979 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 64.693     High  
cufflinks 77.763     High  
cufflinks 95.944     High  
cufflinks 142.821     High  
cufflinks 52.975     High  
cufflinks 53.395     High  
cufflinks 64.248     High  
cufflinks 73.411     High  
cufflinks 62.302     High  
cufflinks 101.608     High  
cufflinks 35.818     High  
cufflinks 44.293     High  
cufflinks 60.755     High  
cufflinks 58.591     High  
cufflinks 91.47     High  
cufflinks 50.029     High  
cufflinks 66.609     High  
cufflinks 0.701       Low
cufflinks 40.696     High  
cufflinks 41.993     High  
cufflinks 24.721     High  
cufflinks 53.95     High  
cufflinks 91.418     High  
cufflinks 71.2     High  
cufflinks 71.576     High  
cufflinks 109.793     High  
cufflinks 52.758     High  
cufflinks 124.524     High  
cufflinks 117.086     High  
cufflinks 32.672     High  

0 Strain