Gene : Bradi4g25342 B. distachyon v3.1
Defline:  (1 of 3) PTHR22952:SF208 - BZIP TRANSCRIPTION FACTOR-LIKE PROTEIN Genomic Order:  3238
Name:  ? Bradi4g25342 Secondary Identifier:  ? PAC:32783544
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g25342 0.5kb upstream 0.5kb upstream 5444 true Bd4: 30571394-30576837 Brachypodium distachyon
Bradi4g25342 0.5kb upstream 0.5kb upstream 500 false Bd4: 30571394-30571893 Brachypodium distachyon
Bradi4g25342 0.5kb downstream 0.5kb downstream 5444 true Bd4: 30571894-30577337 Brachypodium distachyon
Bradi4g25342 0.5kb downstream 0.5kb downstream 500 false Bd4: 30576838-30577337 Brachypodium distachyon
Bradi4g25342 1.0kb upstream 1.0kb upstream 5944 true Bd4: 30570894-30576837 Brachypodium distachyon
Bradi4g25342 1.0kb upstream 1.0kb upstream 1000 false Bd4: 30570894-30571893 Brachypodium distachyon
Bradi4g25342 1.0kb downstream 1.0kb downstream 5944 true Bd4: 30571894-30577837 Brachypodium distachyon
Bradi4g25342 1.0kb downstream 1.0kb downstream 1000 false Bd4: 30576838-30577837 Brachypodium distachyon
Bradi4g25342 2.0kb upstream 2.0kb upstream 6944 true Bd4: 30569894-30576837 Brachypodium distachyon
Bradi4g25342 2.0kb upstream 2.0kb upstream 2000 false Bd4: 30569894-30571893 Brachypodium distachyon
Bradi4g25342 2.0kb downstream 2.0kb downstream 6944 true Bd4: 30571894-30578837 Brachypodium distachyon
Bradi4g25342 2.0kb downstream 2.0kb downstream 2000 false Bd4: 30576838-30578837 Brachypodium distachyon
Bradi4g25342 5.0kb upstream 5.0kb upstream 9944 true Bd4: 30566894-30576837 Brachypodium distachyon
Bradi4g25342 5.0kb upstream 5.0kb upstream 5000 false Bd4: 30566894-30571893 Brachypodium distachyon
Bradi4g25342 5.0kb downstream 5.0kb downstream 9944 true Bd4: 30571894-30581837 Brachypodium distachyon
Bradi4g25342 5.0kb downstream 5.0kb downstream 5000 false Bd4: 30576838-30581837 Brachypodium distachyon
Bradi4g25342 10.0kb upstream 10.0kb upstream 14944 true Bd4: 30561894-30576837 Brachypodium distachyon
Bradi4g25342 10.0kb upstream 10.0kb upstream 10000 false Bd4: 30561894-30571893 Brachypodium distachyon
Bradi4g25342 10.0kb downstream 10.0kb downstream 14944 true Bd4: 30571894-30586837 Brachypodium distachyon
Bradi4g25342 10.0kb downstream 10.0kb downstream 10000 false Bd4: 30576838-30586837 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124545127 5269 Grass View MSA
122047006 5273 Angiosperm View MSA
121351169 5274 Embryophyte View MSA
123425858 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.014     Low  
cufflinks 0.039     Low  
cufflinks 0.015     Low  
cufflinks 0.033     Low  
cufflinks 0.199       High
cufflinks 0.016     Low  
cufflinks 0.024     Low  
cufflinks 0.036     Low  
cufflinks 0.023     Low  
cufflinks 0.039     Low  
cufflinks 0.024     Low  
cufflinks 0.016     Low  
cufflinks 0.061        
cufflinks 0.018     Low  
cufflinks 0.017     Low  
cufflinks 0.01     Low Low
cufflinks 0.039     Low  
cufflinks 0.01     Low Low
cufflinks 0.261       High
cufflinks 1.617       High
cufflinks 0.03     Low  
cufflinks 0.034     Low  
cufflinks 0.066     Low  
cufflinks 0.038     Low  
cufflinks 0.037     Low  
cufflinks 0.021     Low  
cufflinks 0.01     Low Low
cufflinks 0.047     Low  
cufflinks 0.042     Low  
cufflinks 0.05     Low  

0 Strain