Gene : Bradi4g04560 B. distachyon v3.1
Defline:  (1 of 1) PTHR21011//PTHR21011:SF4 - MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S6 Genomic Order:  587
Name:  ? Bradi4g04560 Secondary Identifier:  ? PAC:32789684
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g04560 0.5kb upstream 0.5kb upstream 4602 true Bd4: 3775155-3779756 Brachypodium distachyon
Bradi4g04560 0.5kb upstream 0.5kb upstream 500 false Bd4: 3779257-3779756 Brachypodium distachyon
Bradi4g04560 0.5kb downstream 0.5kb downstream 4602 true Bd4: 3774655-3779256 Brachypodium distachyon
Bradi4g04560 0.5kb downstream 0.5kb downstream 500 false Bd4: 3774655-3775154 Brachypodium distachyon
Bradi4g04560 1.0kb upstream 1.0kb upstream 5102 true Bd4: 3775155-3780256 Brachypodium distachyon
Bradi4g04560 1.0kb upstream 1.0kb upstream 1000 false Bd4: 3779257-3780256 Brachypodium distachyon
Bradi4g04560 1.0kb downstream 1.0kb downstream 5102 true Bd4: 3774155-3779256 Brachypodium distachyon
Bradi4g04560 1.0kb downstream 1.0kb downstream 1000 false Bd4: 3774155-3775154 Brachypodium distachyon
Bradi4g04560 2.0kb upstream 2.0kb upstream 6102 true Bd4: 3775155-3781256 Brachypodium distachyon
Bradi4g04560 2.0kb upstream 2.0kb upstream 2000 false Bd4: 3779257-3781256 Brachypodium distachyon
Bradi4g04560 2.0kb downstream 2.0kb downstream 6102 true Bd4: 3773155-3779256 Brachypodium distachyon
Bradi4g04560 2.0kb downstream 2.0kb downstream 2000 false Bd4: 3773155-3775154 Brachypodium distachyon
Bradi4g04560 5.0kb upstream 5.0kb upstream 9102 true Bd4: 3775155-3784256 Brachypodium distachyon
Bradi4g04560 5.0kb upstream 5.0kb upstream 5000 false Bd4: 3779257-3784256 Brachypodium distachyon
Bradi4g04560 5.0kb downstream 5.0kb downstream 9102 true Bd4: 3770155-3779256 Brachypodium distachyon
Bradi4g04560 5.0kb downstream 5.0kb downstream 5000 false Bd4: 3770155-3775154 Brachypodium distachyon
Bradi4g04560 10.0kb upstream 10.0kb upstream 14102 true Bd4: 3775155-3789256 Brachypodium distachyon
Bradi4g04560 10.0kb upstream 10.0kb upstream 10000 false Bd4: 3779257-3789256 Brachypodium distachyon
Bradi4g04560 10.0kb downstream 10.0kb downstream 14102 true Bd4: 3765155-3779256 Brachypodium distachyon
Bradi4g04560 10.0kb downstream 10.0kb downstream 10000 false Bd4: 3765155-3775154 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576263 5269 Grass View MSA
122045597 5273 Angiosperm View MSA
121347704 5274 Embryophyte View MSA
123380604 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.678     High  
cufflinks 21.841     High  
cufflinks 21.737     High  
cufflinks 30.747     High High
cufflinks 11.491     High  
cufflinks 16.108     High  
cufflinks 18.819     High  
cufflinks 11.55     High  
cufflinks 13.749     High  
cufflinks 30.262     High High
cufflinks 16.871     High  
cufflinks 14.24     High  
cufflinks 11.293     High  
cufflinks 19.646     High  
cufflinks 12.875     High  
cufflinks 15.755     High  
cufflinks 21.096     High  
cufflinks 3.365       Low
cufflinks 14.443     High  
cufflinks 10.808        
cufflinks 14.352     High  
cufflinks 14.078     High  
cufflinks 11.488     High  
cufflinks 14.556     High  
cufflinks 22.497     High  
cufflinks 28.832     High  
cufflinks 14.211     High  
cufflinks 26.218     High  
cufflinks 20.841     High  
cufflinks 18.672     High  

0 Strain