Gene : Bradi4g24378 B. distachyon v3.1
Defline:  (1 of 1) PF10189 - Conserved protein (DUF2356) (DUF2356) Genomic Order:  3104
Name:  ? Bradi4g24378 Secondary Identifier:  ? PAC:32789188
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g24378 0.5kb upstream 0.5kb upstream 2054 true Bd4: 29418560-29420613 Brachypodium distachyon
Bradi4g24378 0.5kb upstream 0.5kb upstream 500 false Bd4: 29420114-29420613 Brachypodium distachyon
Bradi4g24378 0.5kb downstream 0.5kb downstream 2054 true Bd4: 29418060-29420113 Brachypodium distachyon
Bradi4g24378 0.5kb downstream 0.5kb downstream 500 false Bd4: 29418060-29418559 Brachypodium distachyon
Bradi4g24378 1.0kb upstream 1.0kb upstream 2554 true Bd4: 29418560-29421113 Brachypodium distachyon
Bradi4g24378 1.0kb upstream 1.0kb upstream 1000 false Bd4: 29420114-29421113 Brachypodium distachyon
Bradi4g24378 1.0kb downstream 1.0kb downstream 2554 true Bd4: 29417560-29420113 Brachypodium distachyon
Bradi4g24378 1.0kb downstream 1.0kb downstream 1000 false Bd4: 29417560-29418559 Brachypodium distachyon
Bradi4g24378 2.0kb upstream 2.0kb upstream 3554 true Bd4: 29418560-29422113 Brachypodium distachyon
Bradi4g24378 2.0kb upstream 2.0kb upstream 2000 false Bd4: 29420114-29422113 Brachypodium distachyon
Bradi4g24378 2.0kb downstream 2.0kb downstream 3554 true Bd4: 29416560-29420113 Brachypodium distachyon
Bradi4g24378 2.0kb downstream 2.0kb downstream 2000 false Bd4: 29416560-29418559 Brachypodium distachyon
Bradi4g24378 5.0kb upstream 5.0kb upstream 6554 true Bd4: 29418560-29425113 Brachypodium distachyon
Bradi4g24378 5.0kb upstream 5.0kb upstream 5000 false Bd4: 29420114-29425113 Brachypodium distachyon
Bradi4g24378 5.0kb downstream 5.0kb downstream 6554 true Bd4: 29413560-29420113 Brachypodium distachyon
Bradi4g24378 5.0kb downstream 5.0kb downstream 5000 false Bd4: 29413560-29418559 Brachypodium distachyon
Bradi4g24378 10.0kb upstream 10.0kb upstream 11554 true Bd4: 29418560-29430113 Brachypodium distachyon
Bradi4g24378 10.0kb upstream 10.0kb upstream 10000 false Bd4: 29420114-29430113 Brachypodium distachyon
Bradi4g24378 10.0kb downstream 10.0kb downstream 11554 true Bd4: 29408560-29420113 Brachypodium distachyon
Bradi4g24378 10.0kb downstream 10.0kb downstream 10000 false Bd4: 29408560-29418559 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026317 5273 Angiosperm View MSA
124581942 5269 Grass View MSA
121296275 5274 Embryophyte View MSA
123334469 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.282        
cufflinks 3.412        
cufflinks 4.02        
cufflinks 2.73        
cufflinks 1.106       Low
cufflinks 2.702        
cufflinks 2.645        
cufflinks 4.345        
cufflinks 3.354        
cufflinks 5.017        
cufflinks 3.073        
cufflinks 4.016        
cufflinks 2.687        
cufflinks 3.15        
cufflinks 3.226        
cufflinks 3.318        
cufflinks 1.789        
cufflinks 4.791        
cufflinks 0.47       Low
cufflinks 0.59       Low
cufflinks 1.639        
cufflinks 8.909       High
cufflinks 4.116        
cufflinks 2.723        
cufflinks 2.211        
cufflinks 3.757        
cufflinks 2.261        
cufflinks 3.694        
cufflinks 6.762       High
cufflinks 4.257        

0 Strain