Gene : Bradi4g05157 B. distachyon v3.1
Defline:  (1 of 1) PTHR24006:SF442 - PROTEIN GADR-4 Genomic Order:  664
Name:  ? Bradi4g05157 Secondary Identifier:  ? PAC:32784450
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g05157 0.5kb upstream 0.5kb upstream 6178 true Bd4: 4241354-4247531 Brachypodium distachyon
Bradi4g05157 0.5kb upstream 0.5kb upstream 500 false Bd4: 4247032-4247531 Brachypodium distachyon
Bradi4g05157 0.5kb downstream 0.5kb downstream 6178 true Bd4: 4240854-4247031 Brachypodium distachyon
Bradi4g05157 0.5kb downstream 0.5kb downstream 500 false Bd4: 4240854-4241353 Brachypodium distachyon
Bradi4g05157 1.0kb upstream 1.0kb upstream 6678 true Bd4: 4241354-4248031 Brachypodium distachyon
Bradi4g05157 1.0kb upstream 1.0kb upstream 1000 false Bd4: 4247032-4248031 Brachypodium distachyon
Bradi4g05157 1.0kb downstream 1.0kb downstream 6678 true Bd4: 4240354-4247031 Brachypodium distachyon
Bradi4g05157 1.0kb downstream 1.0kb downstream 1000 false Bd4: 4240354-4241353 Brachypodium distachyon
Bradi4g05157 2.0kb upstream 2.0kb upstream 7678 true Bd4: 4241354-4249031 Brachypodium distachyon
Bradi4g05157 2.0kb upstream 2.0kb upstream 2000 false Bd4: 4247032-4249031 Brachypodium distachyon
Bradi4g05157 2.0kb downstream 2.0kb downstream 7678 true Bd4: 4239354-4247031 Brachypodium distachyon
Bradi4g05157 2.0kb downstream 2.0kb downstream 2000 false Bd4: 4239354-4241353 Brachypodium distachyon
Bradi4g05157 5.0kb upstream 5.0kb upstream 10678 true Bd4: 4241354-4252031 Brachypodium distachyon
Bradi4g05157 5.0kb upstream 5.0kb upstream 5000 false Bd4: 4247032-4252031 Brachypodium distachyon
Bradi4g05157 5.0kb downstream 5.0kb downstream 10678 true Bd4: 4236354-4247031 Brachypodium distachyon
Bradi4g05157 5.0kb downstream 5.0kb downstream 5000 false Bd4: 4236354-4241353 Brachypodium distachyon
Bradi4g05157 10.0kb upstream 10.0kb upstream 15678 true Bd4: 4241354-4257031 Brachypodium distachyon
Bradi4g05157 10.0kb upstream 10.0kb upstream 10000 false Bd4: 4247032-4257031 Brachypodium distachyon
Bradi4g05157 10.0kb downstream 10.0kb downstream 15678 true Bd4: 4231354-4247031 Brachypodium distachyon
Bradi4g05157 10.0kb downstream 10.0kb downstream 10000 false Bd4: 4231354-4241353 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570385 5269 Grass View MSA
122041670 5273 Angiosperm View MSA
123428966 5275 Viridiplantae View MSA
121346747 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.711        
cufflinks 6.737        
cufflinks 10.193        
cufflinks 4.913       Low
cufflinks 3.555       Low
cufflinks 7.176        
cufflinks 6.951        
cufflinks 7.501        
cufflinks 6.437        
cufflinks 12.299     High High
cufflinks 12.897     High High
cufflinks 7.989        
cufflinks 10.093     High  
cufflinks 7.849     High  
cufflinks 8.029        
cufflinks 6.864        
cufflinks 5.683        
cufflinks 13.609     High High
cufflinks 12.275       High
cufflinks 6.121        
cufflinks 9.169        
cufflinks 14.104     High High
cufflinks 6.814        
cufflinks 5.39        
cufflinks 5.356        
cufflinks 14.508     High High
cufflinks 12.717     High High
cufflinks 18.643     High High
cufflinks 17.354     High High
cufflinks 7.935        

0 Strain