Gene : Bradi4g05110 B. distachyon v3.1
Defline:  (1 of 1) PTHR13251 - EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1 Genomic Order:  658
Name:  ? Bradi4g05110 Secondary Identifier:  ? PAC:32783917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g05110 0.5kb upstream 0.5kb upstream 12666 true Bd4: 4196836-4209501 Brachypodium distachyon
Bradi4g05110 0.5kb upstream 0.5kb upstream 500 false Bd4: 4196836-4197335 Brachypodium distachyon
Bradi4g05110 0.5kb downstream 0.5kb downstream 12666 true Bd4: 4197336-4210001 Brachypodium distachyon
Bradi4g05110 0.5kb downstream 0.5kb downstream 500 false Bd4: 4209502-4210001 Brachypodium distachyon
Bradi4g05110 1.0kb upstream 1.0kb upstream 13166 true Bd4: 4196336-4209501 Brachypodium distachyon
Bradi4g05110 1.0kb upstream 1.0kb upstream 1000 false Bd4: 4196336-4197335 Brachypodium distachyon
Bradi4g05110 1.0kb downstream 1.0kb downstream 13166 true Bd4: 4197336-4210501 Brachypodium distachyon
Bradi4g05110 1.0kb downstream 1.0kb downstream 1000 false Bd4: 4209502-4210501 Brachypodium distachyon
Bradi4g05110 2.0kb upstream 2.0kb upstream 14166 true Bd4: 4195336-4209501 Brachypodium distachyon
Bradi4g05110 2.0kb upstream 2.0kb upstream 2000 false Bd4: 4195336-4197335 Brachypodium distachyon
Bradi4g05110 2.0kb downstream 2.0kb downstream 14166 true Bd4: 4197336-4211501 Brachypodium distachyon
Bradi4g05110 2.0kb downstream 2.0kb downstream 2000 false Bd4: 4209502-4211501 Brachypodium distachyon
Bradi4g05110 5.0kb upstream 5.0kb upstream 17166 true Bd4: 4192336-4209501 Brachypodium distachyon
Bradi4g05110 5.0kb upstream 5.0kb upstream 5000 false Bd4: 4192336-4197335 Brachypodium distachyon
Bradi4g05110 5.0kb downstream 5.0kb downstream 17166 true Bd4: 4197336-4214501 Brachypodium distachyon
Bradi4g05110 5.0kb downstream 5.0kb downstream 5000 false Bd4: 4209502-4214501 Brachypodium distachyon
Bradi4g05110 10.0kb upstream 10.0kb upstream 22166 true Bd4: 4187336-4209501 Brachypodium distachyon
Bradi4g05110 10.0kb upstream 10.0kb upstream 10000 false Bd4: 4187336-4197335 Brachypodium distachyon
Bradi4g05110 10.0kb downstream 10.0kb downstream 22166 true Bd4: 4197336-4219501 Brachypodium distachyon
Bradi4g05110 10.0kb downstream 10.0kb downstream 10000 false Bd4: 4209502-4219501 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578118 5269 Grass View MSA
122046287 5273 Angiosperm View MSA
121348694 5274 Embryophyte View MSA
123380976 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.161        
cufflinks 8.78        
cufflinks 9.351        
cufflinks 6.627        
cufflinks 3.969        
cufflinks 7.886        
cufflinks 6.917        
cufflinks 5.824        
cufflinks 7.39        
cufflinks 4.55        
cufflinks 4.043        
cufflinks 7.971        
cufflinks 3.3        
cufflinks 2.755       Low
cufflinks 3.621        
cufflinks 7.871        
cufflinks 4.142        
cufflinks 16.063     High High
cufflinks 7.726        
cufflinks 2.065       Low
cufflinks 6.279        
cufflinks 9.648        
cufflinks 6.339        
cufflinks 6.629        
cufflinks 6.062        
cufflinks 7.931        
cufflinks 3.632        
cufflinks 7.547        
cufflinks 7.961        
cufflinks 10.77       High

0 Strain