Gene : Bradi4g05317 B. distachyon v3.1
Defline:  (1 of 1) PTHR14222:SF1 - CONDENSIN-2 COMPLEX SUBUNIT D3 Genomic Order:  686
Name:  ? Bradi4g05317 Secondary Identifier:  ? PAC:32785364
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g05317 0.5kb upstream 0.5kb upstream 6974 true Bd4: 4395599-4402572 Brachypodium distachyon
Bradi4g05317 0.5kb upstream 0.5kb upstream 500 false Bd4: 4395599-4396098 Brachypodium distachyon
Bradi4g05317 0.5kb downstream 0.5kb downstream 6974 true Bd4: 4396099-4403072 Brachypodium distachyon
Bradi4g05317 0.5kb downstream 0.5kb downstream 500 false Bd4: 4402573-4403072 Brachypodium distachyon
Bradi4g05317 1.0kb upstream 1.0kb upstream 7474 true Bd4: 4395099-4402572 Brachypodium distachyon
Bradi4g05317 1.0kb upstream 1.0kb upstream 1000 false Bd4: 4395099-4396098 Brachypodium distachyon
Bradi4g05317 1.0kb downstream 1.0kb downstream 7474 true Bd4: 4396099-4403572 Brachypodium distachyon
Bradi4g05317 1.0kb downstream 1.0kb downstream 1000 false Bd4: 4402573-4403572 Brachypodium distachyon
Bradi4g05317 2.0kb upstream 2.0kb upstream 8474 true Bd4: 4394099-4402572 Brachypodium distachyon
Bradi4g05317 2.0kb upstream 2.0kb upstream 2000 false Bd4: 4394099-4396098 Brachypodium distachyon
Bradi4g05317 2.0kb downstream 2.0kb downstream 8474 true Bd4: 4396099-4404572 Brachypodium distachyon
Bradi4g05317 2.0kb downstream 2.0kb downstream 2000 false Bd4: 4402573-4404572 Brachypodium distachyon
Bradi4g05317 5.0kb upstream 5.0kb upstream 11474 true Bd4: 4391099-4402572 Brachypodium distachyon
Bradi4g05317 5.0kb upstream 5.0kb upstream 5000 false Bd4: 4391099-4396098 Brachypodium distachyon
Bradi4g05317 5.0kb downstream 5.0kb downstream 11474 true Bd4: 4396099-4407572 Brachypodium distachyon
Bradi4g05317 5.0kb downstream 5.0kb downstream 5000 false Bd4: 4402573-4407572 Brachypodium distachyon
Bradi4g05317 10.0kb upstream 10.0kb upstream 16474 true Bd4: 4386099-4402572 Brachypodium distachyon
Bradi4g05317 10.0kb upstream 10.0kb upstream 10000 false Bd4: 4386099-4396098 Brachypodium distachyon
Bradi4g05317 10.0kb downstream 10.0kb downstream 16474 true Bd4: 4396099-4412572 Brachypodium distachyon
Bradi4g05317 10.0kb downstream 10.0kb downstream 10000 false Bd4: 4402573-4412572 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027913 5273 Angiosperm View MSA
124575652 5269 Grass View MSA
121345565 5274 Embryophyte View MSA
123425624 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.338        
cufflinks 3.671       High
cufflinks 3.479       High
cufflinks 2.534        
cufflinks 0.799        
cufflinks 3.433       High
cufflinks 3.283        
cufflinks 2.672        
cufflinks 2.785        
cufflinks 1.37        
cufflinks 0.454       Low
cufflinks 3.039        
cufflinks 0.693       Low
cufflinks 0.382       Low
cufflinks 0.658       Low
cufflinks 3.276        
cufflinks 1.188        
cufflinks 4.64       High
cufflinks 1.05        
cufflinks 0.4       Low
cufflinks 1.436        
cufflinks 3.189        
cufflinks 2.291        
cufflinks 1.984        
cufflinks 2.473        
cufflinks 2.495        
cufflinks 0.647       Low
cufflinks 2.047        
cufflinks 2.114        
cufflinks 3.379        

0 Strain