Gene : Bradi4g09631 B. distachyon v3.1
Defline:  (1 of 6) PF13359 - DDE superfamily endonuclease (DDE_Tnp_4) Genomic Order:  1289
Name:  ? Bradi4g09631 Secondary Identifier:  ? PAC:32788706
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g09631 0.5kb upstream 0.5kb upstream 11105 true Bd4: 9063743-9074847 Brachypodium distachyon
Bradi4g09631 0.5kb upstream 0.5kb upstream 500 false Bd4: 9074348-9074847 Brachypodium distachyon
Bradi4g09631 0.5kb downstream 0.5kb downstream 11105 true Bd4: 9063243-9074347 Brachypodium distachyon
Bradi4g09631 0.5kb downstream 0.5kb downstream 500 false Bd4: 9063243-9063742 Brachypodium distachyon
Bradi4g09631 1.0kb upstream 1.0kb upstream 11605 true Bd4: 9063743-9075347 Brachypodium distachyon
Bradi4g09631 1.0kb upstream 1.0kb upstream 1000 false Bd4: 9074348-9075347 Brachypodium distachyon
Bradi4g09631 1.0kb downstream 1.0kb downstream 11605 true Bd4: 9062743-9074347 Brachypodium distachyon
Bradi4g09631 1.0kb downstream 1.0kb downstream 1000 false Bd4: 9062743-9063742 Brachypodium distachyon
Bradi4g09631 2.0kb upstream 2.0kb upstream 12605 true Bd4: 9063743-9076347 Brachypodium distachyon
Bradi4g09631 2.0kb upstream 2.0kb upstream 2000 false Bd4: 9074348-9076347 Brachypodium distachyon
Bradi4g09631 2.0kb downstream 2.0kb downstream 12605 true Bd4: 9061743-9074347 Brachypodium distachyon
Bradi4g09631 2.0kb downstream 2.0kb downstream 2000 false Bd4: 9061743-9063742 Brachypodium distachyon
Bradi4g09631 5.0kb upstream 5.0kb upstream 15605 true Bd4: 9063743-9079347 Brachypodium distachyon
Bradi4g09631 5.0kb upstream 5.0kb upstream 5000 false Bd4: 9074348-9079347 Brachypodium distachyon
Bradi4g09631 5.0kb downstream 5.0kb downstream 15605 true Bd4: 9058743-9074347 Brachypodium distachyon
Bradi4g09631 5.0kb downstream 5.0kb downstream 5000 false Bd4: 9058743-9063742 Brachypodium distachyon
Bradi4g09631 10.0kb upstream 10.0kb upstream 20605 true Bd4: 9063743-9084347 Brachypodium distachyon
Bradi4g09631 10.0kb upstream 10.0kb upstream 10000 false Bd4: 9074348-9084347 Brachypodium distachyon
Bradi4g09631 10.0kb downstream 10.0kb downstream 20605 true Bd4: 9053743-9074347 Brachypodium distachyon
Bradi4g09631 10.0kb downstream 10.0kb downstream 10000 false Bd4: 9053743-9063742 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121972233 5273 Angiosperm View MSA
124545982 5269 Grass View MSA
121242708 5274 Embryophyte View MSA
123281495 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.063     Low Low
cufflinks 0.59        
cufflinks 0.576        
cufflinks 0.379        
cufflinks 0.047     Low Low
cufflinks 0.512        
cufflinks 0.478        
cufflinks 0.378        
cufflinks 0.528        
cufflinks 0.232        
cufflinks 0.279        
cufflinks 0.475        
cufflinks 0.282        
cufflinks 0.235        
cufflinks 0.147        
cufflinks 0.411        
cufflinks 0.107     Low Low
cufflinks 0.709       High
cufflinks 0.277        
cufflinks 0.033     Low Low
cufflinks 0.269        
cufflinks 0.5        
cufflinks 0.389        
cufflinks 0.37        
cufflinks 0.327        
cufflinks 0.452        
cufflinks 0.322        
cufflinks 0.45        
cufflinks 0.43        
cufflinks 0.546        

0 Strain