Gene : Bradi4g21756 B. distachyon v3.1
Defline:  (1 of 2) PTHR23344:SF28 - GLYCEROPHOSPHODIESTER PHOSPHODIESTERASE 1 Genomic Order:  2749
Name:  ? Bradi4g21756 Secondary Identifier:  ? PAC:32790477
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7409 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g21756 0.5kb upstream 0.5kb upstream 5325 true Bd4: 25241599-25246923 Brachypodium distachyon
Bradi4g21756 0.5kb upstream 0.5kb upstream 500 false Bd4: 25241599-25242098 Brachypodium distachyon
Bradi4g21756 0.5kb downstream 0.5kb downstream 5325 true Bd4: 25242099-25247423 Brachypodium distachyon
Bradi4g21756 0.5kb downstream 0.5kb downstream 500 false Bd4: 25246924-25247423 Brachypodium distachyon
Bradi4g21756 1.0kb upstream 1.0kb upstream 5825 true Bd4: 25241099-25246923 Brachypodium distachyon
Bradi4g21756 1.0kb upstream 1.0kb upstream 1000 false Bd4: 25241099-25242098 Brachypodium distachyon
Bradi4g21756 1.0kb downstream 1.0kb downstream 5825 true Bd4: 25242099-25247923 Brachypodium distachyon
Bradi4g21756 1.0kb downstream 1.0kb downstream 1000 false Bd4: 25246924-25247923 Brachypodium distachyon
Bradi4g21756 2.0kb upstream 2.0kb upstream 6825 true Bd4: 25240099-25246923 Brachypodium distachyon
Bradi4g21756 2.0kb upstream 2.0kb upstream 2000 false Bd4: 25240099-25242098 Brachypodium distachyon
Bradi4g21756 2.0kb downstream 2.0kb downstream 6825 true Bd4: 25242099-25248923 Brachypodium distachyon
Bradi4g21756 2.0kb downstream 2.0kb downstream 2000 false Bd4: 25246924-25248923 Brachypodium distachyon
Bradi4g21756 5.0kb upstream 5.0kb upstream 9825 true Bd4: 25237099-25246923 Brachypodium distachyon
Bradi4g21756 5.0kb upstream 5.0kb upstream 5000 false Bd4: 25237099-25242098 Brachypodium distachyon
Bradi4g21756 5.0kb downstream 5.0kb downstream 9825 true Bd4: 25242099-25251923 Brachypodium distachyon
Bradi4g21756 5.0kb downstream 5.0kb downstream 5000 false Bd4: 25246924-25251923 Brachypodium distachyon
Bradi4g21756 10.0kb upstream 10.0kb upstream 14825 true Bd4: 25232099-25246923 Brachypodium distachyon
Bradi4g21756 10.0kb upstream 10.0kb upstream 10000 false Bd4: 25232099-25242098 Brachypodium distachyon
Bradi4g21756 10.0kb downstream 10.0kb downstream 14825 true Bd4: 25242099-25256923 Brachypodium distachyon
Bradi4g21756 10.0kb downstream 10.0kb downstream 10000 false Bd4: 25246924-25256923 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581521 5269 Grass View MSA
122047219 5273 Angiosperm View MSA
121349016 5274 Embryophyte View MSA
123427418 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.604        
cufflinks 5.06        
cufflinks 4.981        
cufflinks 4.941        
cufflinks 3.357        
cufflinks 3.95        
cufflinks 4.246        
cufflinks 3.492        
cufflinks 3.99        
cufflinks 6.787       High
cufflinks 2.878       Low
cufflinks 3.334        
cufflinks 2.085       Low
cufflinks 3.006       Low
cufflinks 2.398       Low
cufflinks 3.815        
cufflinks 4.342        
cufflinks 6.575       High
cufflinks 5.003        
cufflinks 2.968       Low
cufflinks 5.714        
cufflinks 4.991        
cufflinks 3.81        
cufflinks 3.72        
cufflinks 4.532        
cufflinks 6.082       High
cufflinks 3.922        
cufflinks 6.676       High
cufflinks 5.614        
cufflinks 4.444        

0 Strain