Gene : Bradi4g09997 B. distachyon v3.1
Defline:  (1 of 1) PTHR22731:SF3 - RIBONUCLEASES P/MRP PROTEIN SUBUNIT POP1 Genomic Order:  1352
Name:  ? Bradi4g09997 Secondary Identifier:  ? PAC:32791231
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g09997 0.5kb upstream 0.5kb upstream 5810 true Bd4: 9621993-9627802 Brachypodium distachyon
Bradi4g09997 0.5kb upstream 0.5kb upstream 500 false Bd4: 9621993-9622492 Brachypodium distachyon
Bradi4g09997 0.5kb downstream 0.5kb downstream 5810 true Bd4: 9622493-9628302 Brachypodium distachyon
Bradi4g09997 0.5kb downstream 0.5kb downstream 500 false Bd4: 9627803-9628302 Brachypodium distachyon
Bradi4g09997 1.0kb upstream 1.0kb upstream 6310 true Bd4: 9621493-9627802 Brachypodium distachyon
Bradi4g09997 1.0kb upstream 1.0kb upstream 1000 false Bd4: 9621493-9622492 Brachypodium distachyon
Bradi4g09997 1.0kb downstream 1.0kb downstream 6310 true Bd4: 9622493-9628802 Brachypodium distachyon
Bradi4g09997 1.0kb downstream 1.0kb downstream 1000 false Bd4: 9627803-9628802 Brachypodium distachyon
Bradi4g09997 2.0kb upstream 2.0kb upstream 7310 true Bd4: 9620493-9627802 Brachypodium distachyon
Bradi4g09997 2.0kb upstream 2.0kb upstream 2000 false Bd4: 9620493-9622492 Brachypodium distachyon
Bradi4g09997 2.0kb downstream 2.0kb downstream 7310 true Bd4: 9622493-9629802 Brachypodium distachyon
Bradi4g09997 2.0kb downstream 2.0kb downstream 2000 false Bd4: 9627803-9629802 Brachypodium distachyon
Bradi4g09997 5.0kb upstream 5.0kb upstream 10310 true Bd4: 9617493-9627802 Brachypodium distachyon
Bradi4g09997 5.0kb upstream 5.0kb upstream 5000 false Bd4: 9617493-9622492 Brachypodium distachyon
Bradi4g09997 5.0kb downstream 5.0kb downstream 10310 true Bd4: 9622493-9632802 Brachypodium distachyon
Bradi4g09997 5.0kb downstream 5.0kb downstream 5000 false Bd4: 9627803-9632802 Brachypodium distachyon
Bradi4g09997 10.0kb upstream 10.0kb upstream 15310 true Bd4: 9612493-9627802 Brachypodium distachyon
Bradi4g09997 10.0kb upstream 10.0kb upstream 10000 false Bd4: 9612493-9622492 Brachypodium distachyon
Bradi4g09997 10.0kb downstream 10.0kb downstream 15310 true Bd4: 9622493-9637802 Brachypodium distachyon
Bradi4g09997 10.0kb downstream 10.0kb downstream 10000 false Bd4: 9627803-9637802 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569970 5269 Grass View MSA
122047231 5273 Angiosperm View MSA
121344727 5274 Embryophyte View MSA
123380091 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.872        
cufflinks 3.968        
cufflinks 3.851        
cufflinks 3.745        
cufflinks 1.774        
cufflinks 3.003        
cufflinks 3.109        
cufflinks 2.616        
cufflinks 2.867        
cufflinks 1.836        
cufflinks 1.636        
cufflinks 2.214        
cufflinks 0.727       Low
cufflinks 0.913       Low
cufflinks 0.65       Low
cufflinks 3.245        
cufflinks 1.839        
cufflinks 5.535       High
cufflinks 3.673        
cufflinks 0.944       Low
cufflinks 2.507        
cufflinks 2.47        
cufflinks 2.493        
cufflinks 2.387        
cufflinks 3.273        
cufflinks 3.314        
cufflinks 1.43        
cufflinks 2.991        
cufflinks 2.48        
cufflinks 2.942        

0 Strain