Gene : Bradi4g10137 B. distachyon v3.1
Defline:  (1 of 4) PTHR23241//PTHR23241:SF55 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED Genomic Order:  1377
Name:  ? Bradi4g10137 Secondary Identifier:  ? PAC:32789047
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g10137 0.5kb upstream 0.5kb upstream 3237 true Bd4: 9788271-9791507 Brachypodium distachyon
Bradi4g10137 0.5kb upstream 0.5kb upstream 500 false Bd4: 9791008-9791507 Brachypodium distachyon
Bradi4g10137 0.5kb downstream 0.5kb downstream 3237 true Bd4: 9787771-9791007 Brachypodium distachyon
Bradi4g10137 0.5kb downstream 0.5kb downstream 500 false Bd4: 9787771-9788270 Brachypodium distachyon
Bradi4g10137 1.0kb upstream 1.0kb upstream 3737 true Bd4: 9788271-9792007 Brachypodium distachyon
Bradi4g10137 1.0kb upstream 1.0kb upstream 1000 false Bd4: 9791008-9792007 Brachypodium distachyon
Bradi4g10137 1.0kb downstream 1.0kb downstream 3737 true Bd4: 9787271-9791007 Brachypodium distachyon
Bradi4g10137 1.0kb downstream 1.0kb downstream 1000 false Bd4: 9787271-9788270 Brachypodium distachyon
Bradi4g10137 2.0kb upstream 2.0kb upstream 4737 true Bd4: 9788271-9793007 Brachypodium distachyon
Bradi4g10137 2.0kb upstream 2.0kb upstream 2000 false Bd4: 9791008-9793007 Brachypodium distachyon
Bradi4g10137 2.0kb downstream 2.0kb downstream 4737 true Bd4: 9786271-9791007 Brachypodium distachyon
Bradi4g10137 2.0kb downstream 2.0kb downstream 2000 false Bd4: 9786271-9788270 Brachypodium distachyon
Bradi4g10137 5.0kb upstream 5.0kb upstream 7737 true Bd4: 9788271-9796007 Brachypodium distachyon
Bradi4g10137 5.0kb upstream 5.0kb upstream 5000 false Bd4: 9791008-9796007 Brachypodium distachyon
Bradi4g10137 5.0kb downstream 5.0kb downstream 7737 true Bd4: 9783271-9791007 Brachypodium distachyon
Bradi4g10137 5.0kb downstream 5.0kb downstream 5000 false Bd4: 9783271-9788270 Brachypodium distachyon
Bradi4g10137 10.0kb upstream 10.0kb upstream 12737 true Bd4: 9788271-9801007 Brachypodium distachyon
Bradi4g10137 10.0kb upstream 10.0kb upstream 10000 false Bd4: 9791008-9801007 Brachypodium distachyon
Bradi4g10137 10.0kb downstream 10.0kb downstream 12737 true Bd4: 9778271-9791007 Brachypodium distachyon
Bradi4g10137 10.0kb downstream 10.0kb downstream 10000 false Bd4: 9778271-9788270 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573218 5269 Grass View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.249        
cufflinks 2.755        
cufflinks 2.95        
cufflinks 3.503        
cufflinks 5.54        
cufflinks 2.597        
cufflinks 2.659        
cufflinks 5.985        
cufflinks 3.576        
cufflinks 3.672        
cufflinks 2.173        
cufflinks 3.902        
cufflinks 1.634       Low
cufflinks 1.856       Low
cufflinks 3.341        
cufflinks 2.041       Low
cufflinks 4.656        
cufflinks 3.977        
cufflinks 6.321        
cufflinks 5.711        
cufflinks 8.188       High
cufflinks 2.87        
cufflinks 6.395        
cufflinks 2.827        
cufflinks 2.855        
cufflinks 2.384        
cufflinks 1.526       Low
cufflinks 3.726        
cufflinks 3.281        
cufflinks 4.895        

0 Strain