Gene : Bradi4g08350 B. distachyon v3.1
Defline:  (1 of 1) K03011 - DNA-directed RNA polymerase II subunit RPB3 (RPB3, POLR2C) Genomic Order:  1103
Name:  ? Bradi4g08350 Secondary Identifier:  ? PAC:32786195
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g08350 0.5kb upstream 0.5kb upstream 6123 true Bd4: 7407888-7414010 Brachypodium distachyon
Bradi4g08350 0.5kb upstream 0.5kb upstream 500 false Bd4: 7407888-7408387 Brachypodium distachyon
Bradi4g08350 0.5kb downstream 0.5kb downstream 6123 true Bd4: 7408388-7414510 Brachypodium distachyon
Bradi4g08350 0.5kb downstream 0.5kb downstream 500 false Bd4: 7414011-7414510 Brachypodium distachyon
Bradi4g08350 1.0kb upstream 1.0kb upstream 6623 true Bd4: 7407388-7414010 Brachypodium distachyon
Bradi4g08350 1.0kb upstream 1.0kb upstream 1000 false Bd4: 7407388-7408387 Brachypodium distachyon
Bradi4g08350 1.0kb downstream 1.0kb downstream 6623 true Bd4: 7408388-7415010 Brachypodium distachyon
Bradi4g08350 1.0kb downstream 1.0kb downstream 1000 false Bd4: 7414011-7415010 Brachypodium distachyon
Bradi4g08350 2.0kb upstream 2.0kb upstream 7623 true Bd4: 7406388-7414010 Brachypodium distachyon
Bradi4g08350 2.0kb upstream 2.0kb upstream 2000 false Bd4: 7406388-7408387 Brachypodium distachyon
Bradi4g08350 2.0kb downstream 2.0kb downstream 7623 true Bd4: 7408388-7416010 Brachypodium distachyon
Bradi4g08350 2.0kb downstream 2.0kb downstream 2000 false Bd4: 7414011-7416010 Brachypodium distachyon
Bradi4g08350 5.0kb upstream 5.0kb upstream 10623 true Bd4: 7403388-7414010 Brachypodium distachyon
Bradi4g08350 5.0kb upstream 5.0kb upstream 5000 false Bd4: 7403388-7408387 Brachypodium distachyon
Bradi4g08350 5.0kb downstream 5.0kb downstream 10623 true Bd4: 7408388-7419010 Brachypodium distachyon
Bradi4g08350 5.0kb downstream 5.0kb downstream 5000 false Bd4: 7414011-7419010 Brachypodium distachyon
Bradi4g08350 10.0kb upstream 10.0kb upstream 15623 true Bd4: 7398388-7414010 Brachypodium distachyon
Bradi4g08350 10.0kb upstream 10.0kb upstream 10000 false Bd4: 7398388-7408387 Brachypodium distachyon
Bradi4g08350 10.0kb downstream 10.0kb downstream 15623 true Bd4: 7408388-7424010 Brachypodium distachyon
Bradi4g08350 10.0kb downstream 10.0kb downstream 10000 false Bd4: 7414011-7424010 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569994 5269 Grass View MSA
122045385 5273 Angiosperm View MSA
121347038 5274 Embryophyte View MSA
123424070 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.543        
cufflinks 5.664        
cufflinks 5.285        
cufflinks 4.52        
cufflinks 6.067        
cufflinks 4.894        
cufflinks 6.035        
cufflinks 5.05        
cufflinks 5.105        
cufflinks 4.764        
cufflinks 4.675        
cufflinks 4.263        
cufflinks 3.777       Low
cufflinks 4.157        
cufflinks 4.056       Low
cufflinks 5.439        
cufflinks 6.398        
cufflinks 10.013       High
cufflinks 11.17       High
cufflinks 5.474        
cufflinks 9.129       High
cufflinks 5.203        
cufflinks 5.546        
cufflinks 4.844        
cufflinks 5.109        
cufflinks 4.93        
cufflinks 5.047        
cufflinks 5.414        
cufflinks 5.18        
cufflinks 6.953        

0 Strain