Gene : Bradi4g08647 B. distachyon v3.1
Defline:  (1 of 1) PTHR10366//PTHR10366:SF333 - NAD DEPENDENT EPIMERASE/DEHYDRATASE Genomic Order:  1140
Name:  ? Bradi4g08647 Secondary Identifier:  ? PAC:32783738
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-361 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g08647 0.5kb upstream 0.5kb upstream 3296 true Bd4: 7765481-7768776 Brachypodium distachyon
Bradi4g08647 0.5kb upstream 0.5kb upstream 500 false Bd4: 7768277-7768776 Brachypodium distachyon
Bradi4g08647 0.5kb downstream 0.5kb downstream 3296 true Bd4: 7764981-7768276 Brachypodium distachyon
Bradi4g08647 0.5kb downstream 0.5kb downstream 500 false Bd4: 7764981-7765480 Brachypodium distachyon
Bradi4g08647 1.0kb upstream 1.0kb upstream 3796 true Bd4: 7765481-7769276 Brachypodium distachyon
Bradi4g08647 1.0kb upstream 1.0kb upstream 1000 false Bd4: 7768277-7769276 Brachypodium distachyon
Bradi4g08647 1.0kb downstream 1.0kb downstream 3796 true Bd4: 7764481-7768276 Brachypodium distachyon
Bradi4g08647 1.0kb downstream 1.0kb downstream 1000 false Bd4: 7764481-7765480 Brachypodium distachyon
Bradi4g08647 2.0kb upstream 2.0kb upstream 4796 true Bd4: 7765481-7770276 Brachypodium distachyon
Bradi4g08647 2.0kb upstream 2.0kb upstream 2000 false Bd4: 7768277-7770276 Brachypodium distachyon
Bradi4g08647 2.0kb downstream 2.0kb downstream 4796 true Bd4: 7763481-7768276 Brachypodium distachyon
Bradi4g08647 2.0kb downstream 2.0kb downstream 2000 false Bd4: 7763481-7765480 Brachypodium distachyon
Bradi4g08647 5.0kb upstream 5.0kb upstream 7796 true Bd4: 7765481-7773276 Brachypodium distachyon
Bradi4g08647 5.0kb upstream 5.0kb upstream 5000 false Bd4: 7768277-7773276 Brachypodium distachyon
Bradi4g08647 5.0kb downstream 5.0kb downstream 7796 true Bd4: 7760481-7768276 Brachypodium distachyon
Bradi4g08647 5.0kb downstream 5.0kb downstream 5000 false Bd4: 7760481-7765480 Brachypodium distachyon
Bradi4g08647 10.0kb upstream 10.0kb upstream 12796 true Bd4: 7765481-7778276 Brachypodium distachyon
Bradi4g08647 10.0kb upstream 10.0kb upstream 10000 false Bd4: 7768277-7778276 Brachypodium distachyon
Bradi4g08647 10.0kb downstream 10.0kb downstream 12796 true Bd4: 7755481-7768276 Brachypodium distachyon
Bradi4g08647 10.0kb downstream 10.0kb downstream 10000 false Bd4: 7755481-7765480 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041043 5273 Angiosperm View MSA
124576364 5269 Grass View MSA
121350507 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.044        
cufflinks 1.325        
cufflinks 1.711        
cufflinks 1.123        
cufflinks 4.129        
cufflinks 1.504        
cufflinks 1.828        
cufflinks 2.547        
cufflinks 2.309        
cufflinks 2.776        
cufflinks 1.7        
cufflinks 1.523        
cufflinks 1.924        
cufflinks 0.809        
cufflinks 2.899        
cufflinks 1.573        
cufflinks 2.381        
cufflinks 15.04     High High
cufflinks 2.498        
cufflinks 2.654        
cufflinks 2.463        
cufflinks 2.017        
cufflinks 2.409        
cufflinks 2.422        
cufflinks 1.893        
cufflinks 1.455        
cufflinks 0.009     Low Low
cufflinks 1.993        
cufflinks 2.035        
cufflinks 3.102        

0 Strain